Pocillopora damicornis (lace coral): 113679103
Help
Entry
113679103 CDS
T05773
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113679103
Membrane trafficking [BR:
pdam04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113679103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_C
VPS13_VAB
WWE
Motif
Other DBs
NCBI-GeneID:
113679103
NCBI-ProteinID:
XP_027051851
LinkDB
All DBs
Position
Unknown
AA seq
1005 aa
AA seq
DB search
MWKGQVELLKGMDELTTFTLESTQVTGYGKHLRLGVLATFDGTMNITLYCPYWMVNKTGL
YLEYKAPYDETVIPHPVSLTEPVMFSHRGKGVAFVRLAESDWSTKFSLDAAGSGGALKIT
KGGKLYEIGMQTTLSYFSLTKIVEFTPFNLINNHTEYTVSLSDSKGPDSKWTKVQPGECV
PFWPNSFPSKNLAIRVGDNEEVSPSFDFEPDITLLLRMNGKVGAVCADMRTKDNAAIITI
TPYFTGAAAVRLENCTQLDICYKQKDCKEHCLHPNQSVLFTWDEPLASREFVWFVKGSEE
KITTDLSQTGFDKFEHHGKKFYYSTFLDGLQRVLLIIDDFTLAFRAQVELKERPSQCITL
ALQGVGLSLVNNEKSIEVAYIGIKPSNIIWEEQKKKGRWKALKLRLCNELEAGWNKLQQD
IAVGATANYIYKSGDLEVDFKQMEIVRPTRQHIRRTFTPGISLEYTSSPNELTLSTKINS
VQIDSQVPGATFQTVLFPVPPPKSIAADSEPKPYIEVSLVAKQEEHTHVNEIKYFKVLIQ
EMDVKVDMGFIMACIGLFSFDTIDTGQESSQYALDKKMVHDKLGEAFAVQAALSTDRNFF
DFFHLSPLKIHVSFSQLGGGAEAKKAQSAIGGGFVSLLLKSVGVAVTEVQDVEFKLAYFE
IKDKVYTQQQLMEVAIKHYYSQALKQLYVLVLGLDVLGNPFALITGLKEGARDFFYEPYQ
GLIQGPGEFAEGLLIGATSLLGHTVGGAAGAVSRITGTLGKGIAALTMDDKYQQERRQAM
GKKPVNVKEGLTRGGKGLLEGVLGGVTGIITKPMQGAKAGGAAGFFKGLGKGVVGVVARP
AGGLVDFASSTFEGIKGSAISGSDVKRLRPPRCFYADKVIKPYNLREALGNAVLQETKKT
RAVLVADTYFCHSRLNTRKTLLITNKHIIVAGKTEVFEAWQIDWMCRFDELTGEPTTEGE
RLVLKVPDKSKAKGIFKRQSDDTKILTPSPEVAQWLVGKIKEARS
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaggccaggttgaacttctcaagggaatggacgaactcacaacatttaccttg
gaatcaactcaagtgacaggttatggaaagcacttgagactgggagtattagccacattt
gatgggacaatgaacattaccttgtactgcccttactggatggtcaacaaaactggactt
tatctggaatacaaggcgccttatgacgagactgttatacctcatcccgtttccttgacc
gagccagtcatgttttctcaccgaggaaaaggagtggcctttgttcgtcttgctgaatct
gattggtccactaaattttctctggacgcggcaggcagtggaggagcgttaaaaatcacg
aagggtgggaaattgtatgagatcggtatgcagacaaccctatcctacttcagtttaacc
aagattgtagaattcacaccgtttaatctcataaataatcacacagagtacacagtgtcg
ctgtcggactcgaaggggccagactcgaagtggactaaagttcaaccaggagagtgtgta
ccattctggccaaattcgttcccatccaagaacctggctatcagagttggggacaatgaa
gaagtatcaccaagctttgacttcgaacccgacatcaccttgctgctgagaatgaacgga
aaggtgggggctgtgtgtgccgacatgcgtacaaaagataatgcagctatcataactatc
acaccatactttaccggagcagctgccgttagactggagaactgcactcagctagacatc
tgctataaacagaaagattgtaaggaacattgtttacatcctaaccagagcgttttgttc
acatgggatgaacccttagcttcgagagagtttgtctggtttgtcaaaggatctgaagag
aaaatcaccactgatttgtcacaaacgggttttgacaagtttgagcaccacggtaagaag
ttttactattccaccttcctggacggtctgcagcgcgtgctcctcatcattgatgacttt
acactggctttcagagctcaagtggaactaaaggagcgcccctcacagtgcatcactttg
gcacttcagggagttggcttgtctcttgtgaacaatgaaaaaagtatcgaggtggcatac
atcggaattaaaccgagtaatattatctgggaagagcagaagaagaaaggaagatggaag
gcactcaagttacgcctctgcaatgaattagaagctggttggaataaattgcagcaagat
attgccgtaggagccacagccaattacatctataagagtggcgacttggaggttgatttt
aaacaaatggagattgtccggcctacacgccagcacatcagaagaacatttacaccagga
atttcattagagtatacatcttcgccaaatgaactcacactttctacaaagatcaattca
gttcagattgacagccaagtcccaggtgccaccttccagaccgtactcttcccagtgccc
cctccaaagtcaatcgccgctgacagtgaaccaaagccgtacattgaagtgagtttagtc
gcaaagcaagaggagcacacgcacgtgaatgagatcaagtacttcaaggttctcattcaa
gagatggacgtaaaggtcgatatgggctttatcatggcctgtattggattattttcgttt
gacactattgacacaggccaagagtccagccagtatgctttggacaaaaaaatggttcat
gacaagcttggagaggcgtttgccgttcaggctgccctaagtactgacagaaactttttc
gacttctttcatctatcaccattgaagattcatgtcagtttttctcagctgggtggcggc
gctgaggccaaaaaggctcagtcagctatcggtggcggttttgtaagcttgttgctcaag
agtgtcggggtagcagtcactgaagtacaagatgtagaattcaagctagcttatttcgaa
ataaaggacaaagtttatacgcagcagcagttaatggaagtcgccatcaagcattactat
agtcaggcactgaagcagttatacgtgttagtactggggcttgatgtattagggaatccg
tttgctttgattaccggcctgaaggaaggagcgagagacttcttttacgaaccttaccag
ggtcttatccagggtcctggcgagtttgcagagggtttgctgattggcgccacgagcttg
ttaggtcacactgttggtggtgcggctggtgcagtctctcgtataactggaacgctgggc
aaaggtatcgctgcactaacaatggatgataaataccaacaggagaggaggcaggcgatg
ggaaagaaacctgttaatgtcaaagaaggactcacaaggggtgggaagggactacttgaa
ggcgttttgggaggtgtgacaggaataataaccaaaccaatgcagggcgcaaaggctggt
ggtgccgcggggtttttcaagggactgggaaagggtgtggttggtgtagtggcacgtcct
gccggaggtttggttgactttgcgagcagcacattcgaaggaattaaaggttctgccatc
agtggaagtgacgttaaacgattacgaccacccagatgtttctacgctgacaaggttatc
aagccatataatctgcgcgaagccctaggaaacgccgtactgcaggaaactaagaaaacg
agagctgtcttggtggccgacacttatttctgtcatagtcgtcttaatactaggaaaaca
cttcttatcacaaacaaacacatcatagttgctggtaaaacagaagtgtttgaagcgtgg
caaattgattggatgtgtagatttgacgaactcactggtgaaccgacaactgaaggagaa
agacttgttctaaaagtgccggacaaatctaaagcaaaaggtatatttaaacggcagtca
gacgatacgaaaattttgacgcccagcccagaagtggctcagtggctggttggaaaaatc
aaagaggcccggtcttaa
DBGET
integrated database retrieval system
