Pocillopora damicornis (lace coral): 113679964
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Entry
113679964 CDS
T05773
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113679964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113679964
Spliceosome [BR:
pdam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113679964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
PRP4
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
WD40_like
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
113679964
NCBI-ProteinID:
XP_027052749
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MSDDEDLAPAVKKQRIHFGSLETVERERLVTGSSNDNDDDRKDDDDQEAEGEDNEVSAAV
LAGIRAGNINISEGEYLELSEDQTSERHQELLAEFERRKKARAITVPTDDASVKARLREI
GEPITLFGEGPPERRDRLRILLSELGEDVSFGNKEVAEKSKQEPEVQEEVWYHEGDPELK
IARLWMAKYSLPRACERLKQMRIKQARPDPEKAAKTQELHRKLRGLNNFCSQIGDDRPLS
YCQFSPDSSMLATASWSGLCKLWSVPDCEPIAVLRGHNERVGSIVFHPQATLSLDESGPC
MASCDADGVVLLWSLNMDTPLANIEGHEKRVSHVAYHPSGRFLASCCFDHSWRLWDLEQL
KEVLHQEGHSREVYSIAFQVDGSLAATCGLDARGLVWDLRTGQCIMGLDGHLKKVLGIDF
APDGYRVATGSEDQKIMIWDLRKRQCVYTIPAHTNLISHVKFQEDFLVSASYDKTVKVWS
HPGWSPLKTLTGHEQKISCVDVSPDGQYVVSSSFDRTFKLWTSD
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaagatttggccccagcggtcaaaaaacaaaggattcactttggaagc
cttgaaactgtagaaagagaacgtctggtcactggatcgtccaacgataatgatgatgat
agaaaagatgatgacgatcaagaagccgagggtgaggacaacgaagtgtccgcggctgtc
ttagctggaattcgagcgggaaatataaatatttccgaaggagaataccttgagctgtca
gaagaccagaccagtgagagacatcaggaacttttggcagaatttgagagaagaaaaaag
gcacgggcaataactgtaccaacagatgatgcttcagttaaggcaagactccgagaaatt
ggagaaccaataactttgtttggagaaggtcctccagagagaagagacagattgagaatc
cttttgtctgaacttggtgaagatgtatcctttggaaataaggaagttgcagagaagtca
aaacaggaaccagaagttcaggaagaagtctggtatcatgaaggagatcctgaactcaaa
atagctcgattatggatggctaaatactctttacctcgggcttgtgaaagattaaagcaa
atgcgtatcaagcaagctagacctgatccagaaaaggctgccaagacacaggagttacat
cggaagctgcggggtctgaacaacttttgtagtcagattggtgatgatagaccactgtct
tactgccagttctccccagactcatccatgctagccactgcatcatggagtggcttgtgt
aagctgtggtcagttcctgactgtgaaccaatagcagttttgcgaggtcataatgagcgt
gttggctccattgtgttccatccccaagctacactgtcattggatgaatcaggaccttgc
atggcatcctgtgatgcagatggtgttgtgcttttgtggtcactgaacatggacacacca
cttgcaaacattgagggacacgagaagcgtgtgtcccatgtggcttaccatccatcagga
cgctttcttgcatcttgttgttttgatcactcctggaggttatgggatttggaacagcta
aaagaggttctccatcaggagggtcactctagagaggtgtacagtattgcatttcaggtt
gatggctcacttgcagccacatgtggcctcgatgcgcggggcctggtatgggaccttaga
acaggtcagtgtattatgggattggatggacatctgaaaaaagtgctaggaatagacttt
gcacctgacggatatcgtgtagctactggaagtgaagatcagaaaattatgatttgggac
ttaaggaagaggcagtgtgtgtacactattcctgctcacaccaaccttatatcacacgtc
aagtttcaagaagacttcttggtctcggcatcctacgacaaaacagtaaaggtttggtcc
caccctggctggtcgcctctcaagaccctgacaggtcatgaacagaaaataagctgtgtc
gatgtttcaccagatggtcagtacgttgtgtccagctccttcgatcgcacattcaagctg
tggacgtccgattga
DBGET
integrated database retrieval system
