KEGG   Pocillopora damicornis (lace coral): 113679968
Entry
113679968         CDS       T05773                                 
Name
(RefSeq) negative elongation factor B-like
  KO
K15180  negative elongation factor B
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113679968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdam03021]
    113679968
Transcription machinery [BR:pdam03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     113679968
SSDB
Motif
Pfam: COBRA1 UTP20
Other DBs
NCBI-GeneID: 113679968
NCBI-ProteinID: XP_027052754
LinkDB
Position
Unknown
AA seq 579 aa
MSGFDQAGLPGPEFITQGLTTAQDFETVNFIENFQQENSIMLPSLQPALPFLDLHDVRRL
QFNSFVMENLREKLLDQVKVLEVDKLKSLLDQCFPFIHVAHLRPVVMEVMKYLPKVPEEC
LEQLANDTQLYQDCSIEVKRQIWIKHHALFGDAVGPLLNQYVEEKYNVLHSTEPLNSHTF
FSVPSKTRRQNPVVQNLAKMIGKSLELYNLVLQFLRTLFLRTKEVHYCTLRSELLMAVHD
LEIKDIKDIDPCHKFTWCLDACIREKVIEGKRTKELQGFLDHAKHSEEQVLGDIAMILCD
PFAINTVAKSVIKRLQRLVNTESLPKTCQDVSFLLRVLNLGVSAWEMISNQHFTEVALSG
ELIHKFLPILMSLMVDSSLHSLHSKHHVDDDNADVEDPIQFTDYFAEITSANSVAFTLAW
CYLLHVINQRDRHTLVAILPWFVNTCQERALDEVSLHTLTSSLAAWQEEFTHPDFCDVVF
DQFLLPLVTHTSVMRHTLRLLSYIFPKLDPQKVLHILTIAQPSSEHSEAVHDLHAMVVER
ISNYSALTPGSSSVEQPSSASSLSSSSHSPLEYIQPASS
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgtctggttttgaccaagcaggactgccgggaccagagtttatcacccaaggactaact
actgcacaagatttcgaaactgtcaacttcatagagaactttcaacaggaaaacagtatc
atgctgccttctctgcaacctgctttgccctttttagacctccatgacgtccgcaggtta
cagttcaatagttttgtgatggaaaacttgcgtgaaaaactgcttgatcaagtgaaggtt
ttggaagtggacaaactaaagagtttgctcgatcagtgctttccgtttatccacgtggct
catctccggccagtcgtgatggaagtcatgaaatatctcccaaaagtccctgaagaatgc
cttgaacaactggcaaatgatactcagttgtaccaagattgctcaattgaggtgaaaagg
cagatctggatcaagcatcatgcactgtttggggatgcggtcggtccccttttgaaccaa
tatgtagaggaaaagtacaatgttcttcactccacagaacctttaaattcgcacacattt
ttttcagttccatccaaaacaaggcgacagaatccagttgtacaaaacttagcaaagatg
ataggaaaatctcttgaactgtataatctagtgctacaattcctgagaacgttgttttta
agaaccaaagaggttcattactgcactcttaggtcagagttactgatggcagtgcatgat
cttgaaattaaagacataaaggacattgatccatgccataaatttacttggtgtcttgat
gcctgtattcgagaaaaagtgatagaaggaaaaaggacaaaggaattacaaggattcttg
gatcatgcaaagcatagtgaagaacaggttcttggagatattgcaatgatcctttgtgac
ccatttgctatcaacactgttgccaagagtgtaatcaagcgtttgcaaagacttgttaac
actgaatcactgcctaaaacatgtcaagatgtgagttttcttttacgagtcttgaacctt
ggagttagtgcctgggagatgatcagtaatcaacattttactgaagtggccttgagtgga
gagctgattcacaagtttcttccaatacttatgtccctgatggtggatagcagcctccac
tctttgcacagcaaacaccatgttgatgatgataatgctgatgtggaggaccctatccag
ttcactgactactttgctgaaattacatcagccaactcagttgccttcacacttgcttgg
tgttatcttctccatgtcattaatcaaagagacagacatacccttgttgccatcttgcct
tggtttgtcaacacatgtcaagagcgagctttggatgaggtctcccttcacactctgacc
agttccctagctgcttggcaggaagagtttacacatcctgatttctgtgatgtggttttt
gaccaatttcttcttcccttggtgacacacacaagtgtaatgcgacacaccctaagattg
ctatcgtacatttttcctaaattggatcctcaaaaggtgttgcacattctgaccattgca
cagccatcaagtgagcacagtgaagctgtccatgatcttcatgccatggtagttgaacgc
atttccaattacagtgcccttacacctggttcatcatctgtggagcagccatcttcagca
tcatctttgtcatcgtcgtcacacagtccactggagtacattcagcctgccagtagctaa

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