Pocillopora damicornis (lace coral): 113679998
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Entry
113679998 CDS
T05773
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdam04040
]
113679998
04091 Lectins [BR:
pdam04091
]
113679998
Ion channels [BR:
pdam04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113679998
Lectins [BR:
pdam04091
]
C-Type lectins
Others
113679998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
GPS
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113679998
NCBI-ProteinID:
XP_027052792
LinkDB
All DBs
Position
Unknown
AA seq
1319 aa
AA seq
DB search
MVTTDFTPFSWDPSGERVTTAVSSLELKNSSGHLLNTTELIHPITIRLQSHQDFTNAAKS
HYVGANRTVFFKINVTQSGMALVLNIRPESNRTEFVVTVKYGERPSPSNSDLKSRIPDLS
SCGKMPDGHVNCSRNPYIVFVNQDFVKNKGFGYYYFGLRAVSRISEILRVKRCSGRGRLK
RSCVQYKEPPTTGESYSVPQYRVGDENYTFQVTPAACLFWNAQLSKWTSEGCQVAELTTQ
DAIYCSCNHLSAFGGQLFVTPNPIDFDKVFTELTGLSDSGNIAVILAVCCVFGFYLFLLV
WARKNDKLDILKVGEKPFVGVPSPGSYFVEVQVSTGIWRNSGTTANIFIILEGELGTSRP
YHLKDDSCIPFARGSVSSFILSIHDSIGPMRTVRVWHDNSGTSPSWFLNYIKVCELTNEK
QWNFVCFAWLAVDRGDGLIDRTLRCTSTADKGIDFAVYVQNRIAGEFSDSHLWFSVATRP
PSYRFTRAQRLSCCLAILLTTMLSSAMFYERETAMDDDQGSLRLGRFVVNFRALVIAGQS
LTIVLPVNILTVALFTHTRSSNENKEMALQRDPHRKFAKKKRDFSFPRWFIFVPWLLCFL
LSSCSAAFVIFYSLQWGADISEQWLISVVMSVVLDIFVSEPIQIIVVAFMLSHIFKGGIQ
RFTWQPYHVDAVVDVEDIQLSGLGNKGIDEEEIEIPKPLSKRQLRRARVARIREVYMYTA
LRNIVSYMLYLLILCIVCYGGRSEHGYPMTSSIKKTFGELDSISNHFNTWDWTRDVLVPG
LFEDGKNVPLKSSSPYIGDGDSVLVGVPRLRQLRVKEGSCDVGIDEITAPFNSCVASYTS
DNEDNTNFYQTRWRQFSPSKNDSLSILYQICPTAWHYSSAERTQSLPLWGKLHLSNFYGK
GGYLAELGYDRNTALKVISELNLFDWIDRFTSAVIVEFTVFNSQVNLFGVIWIPIEFSPS
GHVVSDHVIRGIHVYGIGGGYSAVTVTCQLFLVGYVVYFVVKETSKMIAGIRIYFSRFLN
WVEFTQTLTVVGFVITHILKQTELFVNTEKLKNNTFQFISFDKGALLEDLETVLISLLMF
LNTLKLLYLLKFNPHVRHLFYVMKGSARELVHCSVLFAVFIFGCIHVGYLLFGGELYSFS
SPFIILQSLLVEGVVGGGVDYFNDCCTVIGPVYVTALKLGLNLICINIFISVLVYNYGNI
RDLTRGKFNLGNFIIVKVKELMGFVVHSSAMDADSSCDHNTNKEENNTLPEVDEILTKLD
QINHHLNILYVDEFGEDLDMFSLWFDLHIQRLKAKDAQERFENDLEEVYEDAQEYLSLA
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggtaacgacagacttcacaccgttctcatgggacccgtcaggagaaagagtgacaacc
gctgtttcaagccttgagcttaagaacagttctgggcatctcttaaatacgacggaacta
atacacccgattactataagactacagagccatcaggacttcacaaacgctgctaagtct
cattatgtgggagccaacagaactgttttcttcaagataaatgtcactcagtcagggatg
gcattggtgttaaacattcgtccggaaagcaacagaacagagtttgtggtgactgttaag
tacggagagcggccttccccaagtaatagcgacttaaaatcaagaatacctgacctttca
tcttgcggtaagatgccagatggtcatgtgaactgttcacgcaatccatatatagtgttt
gtgaaccaagactttgttaaaaacaaaggttttggatattactactttgggctaagagcc
gtgtcaagaatttctgagatcctaagggttaagcgctgctcaggtcgcggccgtttgaag
cggtcgtgtgtacagtacaaggaaccacccaccactggtgaaagttacagcgtacctcaa
taccgtgtaggggatgaaaattacacctttcaggtgacgccagctgcttgcctgttctgg
aatgcgcagttatcgaaatggacctcagaggggtgccaggtagccgaattgactactcaa
gatgccatttactgctcctgtaatcacttgagtgcttttgggggtcagttatttgtcacg
ccgaatccaatcgattttgataaagttttcactgaactaactggcctatcagatagtgga
aacatagctgtcattttagcggtttgctgtgtatttggtttttacctatttttattggtg
tgggctcgaaagaatgacaaacttgacatcttgaaggtgggggaaaagccattcgtagga
gttccttcaccaggctcttatttcgtcgaggttcaagtatccacaggcatttggcgaaac
tccggcaccactgctaacatttttattatactagagggggagctaggcactagccgacct
taccatttgaaagacgattcgtgtatccctttcgcaagggggagcgttagttcctttatc
ctttcgattcatgacagtattggtcccatgagaaccgtgcgcgtatggcatgacaactcg
ggcaccagtccatcgtggtttttgaattatatcaaggtttgcgaactgaccaatgagaag
caatggaactttgtgtgtttcgcgtggctggctgttgatagaggtgatggattaatagac
cggactcttcgttgtacttcaactgccgacaaaggaattgattttgcagtttatgttcag
aatagaattgctggtgagttcagtgattcacatttatggttttctgtcgcaacaagacca
ccaagttatcgatttactcgagctcaacgtttatcttgctgtctagctatattactgact
accatgctaagcagtgccatgttttacgagcgtgaaacagcgatggacgatgatcaagga
tcgttgaggttgggccgttttgttgtgaacttcagagcgctcgtcattgcagggcagagt
cttacgattgtacttcctgtcaatattttgaccgtggcactttttactcacactcgttct
tcaaacgagaataaggaaatggctctccaaagggacccgcataggaaattcgccaagaag
aaacgtgacttctcttttccacgctggtttatattcgttccttggctcttgtgtttcctc
ctctcgtcatgttcggcggcttttgttatcttctacagtcttcagtggggtgcagatata
agtgagcagtggctgatttcagttgtaatgtcagttgtattggacatatttgtatcggaa
cctattcaaatcatagttgttgcctttatgctatctcacatttttaaaggaggaattcaa
agatttacgtggcaaccttatcacgttgacgcagtcgttgatgtcgaagatattcaattg
agtgggttaggcaacaaagggattgacgaggaagaaattgaaataccaaagccactaagc
aaaaggcagttacgtcgcgcaagggtcgctcgaataagggaggtgtatatgtatactgcg
cttcggaatatagtgtcgtacatgctgtacttgttaattctatgtattgtttgttacggt
ggacgtagcgagcatgggtacccgatgacatcttccattaagaagacatttggggaactt
gattcgatatcaaatcactttaacacttgggactggacacgtgacgttttagtaccagga
ctttttgaagacgggaaaaacgtcccactgaagagttccagtccttacattggagatggc
gactctgttcttgttggagtgcctcgcctcagacagctgcgagtcaaagaaggttcttgc
gatgtcggcatagatgaaataacagccccattcaactcctgcgtggcttcatatacatcc
gataacgaggacaacaccaacttctatcaaacacgatggcgccaattttccccatcgaag
aatgattcgctaagcattctctatcagatatgtcctactgcttggcattattcttcggca
gagcgaactcaaagccttcctttgtggggaaaacttcatctgtcaaacttttatggtaaa
ggaggctacctggccgagttgggctatgacagaaatacagcactgaaagtcatatctgaa
cttaatctgtttgactggattgacaggtttaccagtgctgtaattgtcgagtttactgtt
tttaactctcaagtgaatttgtttggcgtgatttggatcccaattgagttttcaccaagt
ggtcacgtggtatctgatcatgtgattcgaggcattcatgtatacggaattggtggaggc
tacagtgctgttaccgtcacctgtcaattgtttctagtgggttatgttgtatactttgtt
gtcaaggaaacgtcgaagatgatcgctggtattcgaatttatttctcacgttttctaaac
tgggtcgaattcacgcagactttaacagtcgtcggttttgttatcacccacattttaaaa
caaacagagctttttgtcaacacagagaaactcaaaaacaatacatttcagtttatcagt
tttgataaaggggctctcttagaggacttggaaacggtcttaatatcgttactgatgttc
ttgaacactttgaagttgctgtatttgctcaaattcaatccccatgtgcggcatttattc
tatgtaatgaagggatctgctcgggaactcgttcattgctcggttctattcgctgtgttc
atatttggatgtattcatgtgggatatcttctatttgggggagaactttactccttttct
tcgcctttcattattctacagtctcttctagtcgaaggagtcgtcggtggcggagtggac
tattttaacgattgttgtacagtcatcggccctgtttacgttacagcgttaaaattggga
ctaaatctcatatgcatcaatattttcatttcagttcttgtttacaattacggcaatatc
agagacctcaccagagggaaattcaatcttggaaacttcattattgtaaaagtaaaggaa
ctcatgggttttgtggttcatagttcagcaatggatgcagacagttcgtgtgatcataac
acaaataaggaggagaacaatacacttcctgaagtggatgagatattaaccaagttggat
cagattaatcaccatttaaatattttgtatgttgacgaattcggtgaagaccttgacatg
ttttctttgtggtttgatcttcacattcaacgcttaaaagctaaggatgcacaagaaagg
tttgagaatgatttagaagaagtttacgaggatgcacaagaatacttaagcctcgcgtag
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