Pocillopora damicornis (lace coral): 113680057
Help
Entry
113680057 CDS
T05773
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113680057
Enzymes [BR:
pdam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113680057
Spliceosome [BR:
pdam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113680057
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
zf-CCHC
ResIII
CMS1
KH_2
KH-I_KHDC4-BBP
MOEP19
Motif
Other DBs
NCBI-GeneID:
113680057
NCBI-ProteinID:
XP_027052862
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MSDWEEDADDSRSTPQNVYIPPSGRGWHNSYVENVEENFSDGRRPGFGRGRANRFGNARE
EYSSPGKRNDYSERGSFGGFSGGESGFGGKQFARGGRSWRGSRQDDGWQDRRNRDYSRGN
ERERNSTEIMVPSDDVRYIIGKGGQKIREIQSESGAYIKVKKDDATYSETPVEISGSEDQ
IKKAKEMIEQIIGPDSSVTNNMGGLSIQNGTSDESSQPVKPKRIPWAKLRSEQEEKEAAR
WADLPPIKKVFYREQPSITNMADEEVEKFRLDNNRIMVENYGESIQDRSIPNPVTTFAEA
YADYPEIMEEMKKAGFVRPSPIQCQSWPVIMSGMDLIGIAQTGTGKTLAFLLPAFLHIDG
QETPRNERGGPTVLVLSPTRELALQIEAEVKKFHYRGIKSVCVYGGGSRKGQIQVVQKGV
EIVIATPGRLNDLLMNEIMDVRSVTYLVLDEADRMLDMGFEPEIRKILLDIRPDRQTIMT
SATWPKSVQRMADQYMKDPMRVFVGSLDLNACHNVTQLVEVLDPAEKKERTLHFISQMTE
SDKVLIFVGKKIKADDIASDFMLSGIQGVQCIHGDREQIDREQALDDFKTGVAKILIATD
VASRGLDIRGVTCVLNFDFPRNIEDYVHRIGRTGRAGKKGTSLTFVTREDWRMAHKLISI
MVEANQEVPDELADMAQRYEEFRERNGYNDRGERGSGGRGGDGCYNCGGSGHFARECPEG
GGERRERGRGGGGGGRGGRGGRGGRGGNFESHFQLWQITLLTSAQGFMTSRTLDP
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactgggaagaagacgcagacgattctaggagcactcctcagaatgtgtatatt
ccacctagcgggagaggatggcacaattcctatgtcgagaacgtcgaggaaaatttttct
gatggtaggcgacccggctttggacgaggaagggcaaatcgatttggaaatgcaagagaa
gagtactcaagcccaggaaagaggaatgattattccgaacgtgggagctttggaggtttc
agtggaggagaaagcgggtttggtggcaaacaattcgcacgtggtggtcgctcgtggaga
ggcagccgccaagatgatggctggcaagatcggagaaacagggattattcccgaggaaat
gaacgtgaaagaaatagtactgagattatggtgccctcagatgatgtgcgctatatcatt
ggcaaaggtggccaaaagataagagaaattcagagtgaaagtggagcatacattaaggtg
aaaaaggatgatgctacttattcggagaccccagtagaaatttctggcagtgaagaccaa
attaaaaaagctaaagaaatgattgaacagattattggtcctgattcatcagtaacaaat
aacatgggaggtctatccattcaaaatggtacttcagatgaaagttcccaaccggttaag
cccaaacgtattccttgggcaaagcttcgttcagaacaggaagaaaaggaagctgcaaga
tgggcagatttaccacccatcaagaaagtattttacagagagcagccatcgattacaaac
atggctgatgaagaagtggagaaatttagattggataataatagaatcatggtagaaaat
tatggggaatccattcaggaccgtagtattccaaaccctgttacaacatttgccgaagct
tatgctgattatcctgaaatcatggaagaaatgaagaaagcaggatttgtcagaccatca
cctattcagtgccagtcctggccagtaatcatgtcagggatggacttgatagggattgct
cagacaggtacaggaaagacattggcctttctacttcctgctttccttcatattgatgga
caagaaacgcctcgtaatgaaagaggtggccctactgtattagttctttcccccacgcga
gaacttgctttgcaaattgaagcagaagttaagaaatttcattacaggggaataaaaagt
gtctgtgtttatggaggtggaagcagaaaaggacagattcaagtagttcagaaaggagtt
gagattgttatagctacccctggtcgattgaatgatttgcttatgaatgaaataatggat
gtcagaagtgtcacctatctggtgcttgatgaggcagatcgtatgcttgatatgggattt
gaaccagagatcaggaaaattttacttgatatcagaccggacaggcaaacaattatgaca
agtgcaacttggccaaaaagtgtccagagaatggctgatcagtacatgaaggatcccatg
agggtgtttgtgggatcactggatttgaatgcttgtcacaatgttacgcagcttgttgag
gttttggatcctgctgaaaagaaagaaaggacgcttcactttatctcgcaaatgactgag
agcgacaaggtgctgattttcgtgggcaagaaaataaaagccgatgacattgcgagtgac
tttatgttgtctggaattcaaggagtacagtgtatacatggggacagggaacaaatcgat
cgcgagcaagcactagatgattttaagacaggcgtggcgaaaatcctcatcgcaaccgac
gtagcttccaggggattggacattcgcggtgtcacatgtgtgctaaattttgacttccca
cgaaacattgaggactacgttcatcgtattggccgcacaggaagggcaggtaagaaaggc
acttcgcttacttttgtgactcgagaggactggagaatggctcacaaactcatcagtatc
atggtggaagccaatcaggaagttcccgatgaactagcggacatggcgcaacgctatgaa
gaattccgtgaacgcaatggttacaacgacaggggggagagaggtagtggaggaagaggc
ggtgacggttgttacaattgtggcgggagtggccactttgcccgggaatgtcccgaggga
gggggtgagagacgagaaagaggacgagggggcggtggtggaggaaggggaggaagggga
ggaaggggaggaaggggaggaaactttgaatcacactttcaactgtggcagataacgctt
ctaaccagcgcgcaagggtttatgacttcgcgcaccttagacccatga
DBGET
integrated database retrieval system
