Pocillopora damicornis (lace coral): 113680278
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Entry
113680278 CDS
T05773
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdam03036
]
113680278
Enzymes [BR:
pdam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113680278
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Meiosis-specific proteins
Others
113680278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113680278
NCBI-ProteinID:
XP_027053096
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
MDSSSFVTQASTPNSFASQWNQKESEWFVSSSQRTQSRYLQPSLLYDEEEADNAHEVVAQ
DSPELFTQHSDFHLRGAPFNASELDMEDSEGFAFQDDVPEEENNQSFYLASVPRHNFDTP
AQLFIPDYGDQPENPNAGIGLRSVNEIPNPFRSVFSKFPYFNIVQSKVFDEVMYTDRPLV
VCAPTGSGKTVIFELAVIRLLMSCEGGLSTAKVVYMAPMKALCSERFTDWSTKFGPFGLR
CKEVTGDSELDDLYELQSVHVIMTTPEKWDSMTRKWRDNRSLVQSVKLFLIDEVHLINDD
ARGATVEAVISRMKTVQSTMTRCSTSGNTSSLGRAGMRLLAISATIPNVEDISAWLGGID
SPASHYSMDDSHRPVKLRKVVLGFPKGNNFSDFRFDLSLNYKLSGIIQTYSDRKPTLVFC
STRKSAQQAAQTLMKDARFIMNSEHRQRLQRIANSLHDSKLRELVMCGIGYHHAGLDPTD
RRNIETMFIKGDLPVLFATSTLAVGVNLPAHLVIIKSTSHYVMGVFQEYSETQILQMIGR
AGRPQFDSFATAVILTTIANKEKYTGLLEGTQKLESSLHHHLIEHLNAEIVLNTITDVSI
AIEWLKSTFLYIRILKNPTHYGIPEGLEKEGLEQKLQDFCLKSLNTLEKAGLIKMDDGFD
LKPTEPGRLMARYCIAYDSMKQFLNIKGTESLSDMVDLVSKCREFSDVKLRMNEKRVLNT
LNKDKNSENVRFPISGRIKSTEQKVNCLIQATLGSLPIAEFSLSQDVAKIFRAGQRITRC
LTELQMLNNNFVSLQNSVILAKCMRARLWENSKFVSRQLEKVGPSLSAMMVNAGLTTLKK
IEETNPREIEMIVNRHPPFGSQIREAASTLPKYEVSVQQTGKHQPDRSEIVITVTMMNYI
KRKDAIGSARNSHFCLLVIADTENNVVFKQKLGDFVFLKEGYWSKRVEVQRTAAQSSDLN
IHLISQEYVGVDVSKRFSPQYSVGQPYLITKNEPQACAPKLVKSNASNSGKFLSSFFKLS
PYCREEEAYNLIHLHFVSIKTSLTIHTCGHECCKQGVSSKTRKRKSQVEQNKEPNCSPLM
STPTIDNQRKITEVDEHGNMNSFLKNLHIRAQAIPGTPAKRLKPSAPETVGASYVDLTLD
KRFGYTRRIPFHICEERSEETVVGEKEHTGSLCWEEVDWHLRKREEKRDTSKDEDQFDDE
LPCFSLNELWNDDELALTLNVESDPHTSPQELHLRQKRNKSLHPLFFDVAAPENRQKISV
VERPMPRSSRFKAESNARVNSCAPLFLGSSQSNRHLRRIPLPVLPPPPTPEAEDFDLTGY
SGSARGTCSSYWNKGQLNLTSTGRMKQCSGLRSPSEDPYDVLEAEDWNILPVVSKPEGQT
NALSSKKKTENETNLLGSQSSTTLDTPSMQGSSCLQKENVIAVEDECTQRCQQSPCSASF
FCSKSSESCEQDFEEKDAFAGIFNGLL
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
atggactcatcatcgtttgttacacaagcatcaactccaaacagctttgctagccaatgg
aaccagaaagaaagcgagtggtttgtaagcagctcgcagcgcacccaatccaggtattta
caaccatcgttgttatacgatgaagaagaagctgataatgcgcatgaagtagtggcacaa
gattcaccagagctctttactcaacacagtgactttcatttacgtggtgctccgttcaat
gcgtctgaactggacatggaagattcagaaggttttgcttttcaagatgatgtccctgaa
gaagaaaataatcaaagcttttatttggcctcagtcccacggcataactttgacactcca
gctcaactttttataccagactatggagatcaacctgagaacccgaatgcagggataggg
cttcgctctgtcaatgagatacccaacccatttcgttcagtatttagcaaatttccctac
tttaacatcgtgcagtcaaaagtatttgacgaggtgatgtacactgatagaccacttgtg
gtgtgcgctccaacaggttctggcaaaacagtaatttttgagcttgctgttattcgtctt
cttatgagctgtgagggaggactaagtacagctaaagtagtttatatggcccctatgaag
gcattatgcagtgaacgcttcactgactggtcgactaaatttggaccgtttggcttaaga
tgcaaagaagtaacaggcgatagtgagttggatgacctttatgaactgcagagcgtccat
gtgataatgaccactcctgaaaaatgggacagcatgacaagaaagtggagagacaacaga
tccctcgtgcagtcagtcaagctttttctcattgatgaggttcatcttattaacgatgac
gcaagaggagccactgttgaagctgtcatcagccgtatgaagaccgttcaatccactatg
acccgctgcagcacttcaggaaataccagcagtcttggtagagcgggcatgcgacttttg
gctatctcagctaccataccaaacgtggaagatatttcagcctggcttggagggattgat
tctcctgcatctcactacagtatggacgattcacaccgaccagtgaaactacgtaaagtt
gttcttggttttcctaaggggaataatttctctgacttccgatttgacttgtctctgaat
tataagttgagtggcatcattcaaacttactcagatcggaaacctactcttgtgttttgt
tcaacacgcaagagtgctcagcaagcagcacagacgcttatgaaagacgcacgctttatc
atgaactcagaacacagacagaggcttcagaggattgctaactctcttcatgattctaaa
ctgagagagttagtgatgtgtgggattgggtaccaccatgcaggactcgatcccacggat
cgaagaaacattgaaacaatgttcatcaaaggcgacttgcctgtactgtttgcaactagt
actctggctgtaggagtaaatcttcccgctcatctggtcatcatcaagtcaacatctcac
tacgtcatgggcgtgtttcaagagtactcagaaacacaaatacttcagatgattggaagg
gcaggaagaccacagtttgattccttcgccactgcagtcattttgacaacaattgcaaac
aaggaaaagtataccggccttcttgaaggcactcagaaattggagagcagtttgcaccat
cacctaatcgagcacttgaacgcagaaatagtccttaacactatcacagacgtttctatt
gccatagagtggttgaagtccaccttcttgtatataagaatattaaagaatcccacacac
tacgggatacctgagggacttgagaaagagggtttggaacaaaagttacaagatttttgt
ttgaagagcctcaacacactggaaaaggctgggctcataaaaatggacgacggttttgat
ctcaagcccacagagccaggtcgcctgatggccagatactgcattgcttacgactccatg
aaacagtttcttaacatcaaaggaacggaaagtcttagtgatatggttgatctggtgtcc
aagtgcagagaattttccgatgtcaagctacgaatgaacgaaaaacgagtactaaatact
ctaaacaaggacaaaaacagcgaaaatgtaaggtttccaatcagtggaagaatcaagtca
acggaacaaaaagttaattgccttatacaagccacgcttggttcacttccaatagcggaa
ttctccctaagccaagatgttgcgaaaatctttcgagccggacaaagaattactcgctgt
ttgactgagctacaaatgttgaataataattttgtgtcacttcagaattcagtcattctc
gcgaagtgtatgagagccagattatgggagaattccaagtttgtctcaaggcaactagag
aaagttggaccttctttgtcggctatgatggtcaacgctgggttgacaaccctcaagaaa
attgaggaaacaaatccgagagaaatagaaatgatcgttaatcgtcatccacctttcgga
agtcagattcgggaagcagcttcaactttaccaaaatatgaggtttctgttcagcagaca
gggaaacatcagccagatcgttccgagattgtaattacagttaccatgatgaactacatc
aagcgaaaagatgcgattgggtcagcaaggaacagccacttctgccttctggtgatcgct
gatactgaaaacaacgtggtgttcaaacagaaattaggagattttgtgtttttgaaagag
ggatactggagtaagagagttgaagtacagcgaacggctgctcagtcttcagatttgaac
atacaccttatcagtcaagaatacgttggtgtggacgtgagtaaacggttctcccctcaa
tacagtgttgggcagccgtatcttatcacgaagaatgaaccacaggcatgtgctcccaaa
cttgtgaagagcaatgcctctaattcaggtaaatttttgtcctcgtttttcaaactctct
ccgtactgtcgcgaggaggaagcttataatttgatacatttacatttcgtatcaattaaa
acttccttgacaatacacacatgtggccatgaatgctgcaaacaaggcgtcagctctaag
acaaggaaaaggaagtcacaggtggaacagaataaagaaccaaattgttcaccattgatg
agtacaccaactatagataatcaaagaaaaattaccgaggtggatgaacacggaaatatg
aattccttcctgaaaaaccttcacataagagcgcaagccattcctggcacgccagccaaa
cgcttaaagccatcggcgccggagaccgttggagccagctatgtggatttaacactggac
aaaagatttggttatacgcgcaggatcccttttcacatctgtgaagagagaagcgaggag
actgtggtgggtgagaaagaacatacgggaagcctttgttgggaagaagttgactggcat
ttaagaaaaagagaagaaaaaagggataccagtaaagatgaagatcagtttgatgatgag
ctgccttgctttagcttgaatgagctatggaatgacgatgaattagccttgactttaaat
gttgaaagcgatcctcacaccagcccacaggagctgcacttgcggcaaaagaggaacaag
tctttgcaccctcttttcttcgacgtggctgctccagaaaaccgccagaagatatcagtt
gtcgaaaggccgatgccaagaagctctcgattcaaagcagaatctaacgcgagagtaaac
tcatgtgctcccttatttctaggcagcagtcaatctaataggcacttgaggagaattccc
ctgcctgtactaccacccccacccacccctgaagcagaggattttgatctaacaggttac
tccgggtccgcaaggggtacatgtagcagttattggaataaagggcaactaaatctcact
agcacaggaagaatgaaacagtgttctgggctgagatcgccatcggaggacccctatgat
gttctagaggcagaagattggaatatcctgcctgttgtttctaagcctgaaggacagacc
aacgctttaagctcgaaaaagaagacagagaatgaaactaatcttttaggctctcagagt
tcaaccacgttggatacaccatcaatgcaaggaagcagttgtttacagaaagagaacgtg
atagcagtcgaagatgagtgtacacagcgatgtcagcaaagtccctgttctgcctccttc
ttctgttctaagtcttctgagagctgtgaacaagacttcgaagagaaagacgcatttgca
gggattttcaatggattgttatag
DBGET
integrated database retrieval system
