Pocillopora damicornis (lace coral): 113680346
Help
Entry
113680346 CDS
T05773
Name
(RefSeq) TATA element modulatory factor-like
KO
K20286
TATA element modulatory factor
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113680346
Membrane trafficking [BR:
pdam04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113680346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
SlyX
DUF641
Sdh5
Motif
Other DBs
NCBI-GeneID:
113680346
NCBI-ProteinID:
XP_027053172
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MSWFDPSGFSSFAKTALSQAQKSIDRVLDIEQDETNSAASKSSASSAPKSSPSLSSGTSS
KDNLTRKKSSSALSGHSASKSARKTSSDVDNSKDGESDGNSFWSSFLGDSFSSAATESKT
SNRRASGQKLGSRISGGKMKNSVDRQDSEDAKILKDEDNLPRALKHQSKKNSVTDTSTRS
SEQSQAPQTSLPVREDLANVGWDISEPDKNSTVAVNFQEAKELTESPGKGELNTHKSPVM
PALRGSKLKSQQSKRSSTSKSRKENKEVLSTENNVCKNNIENVEQDALIVEHDKTPDDKS
ESVNEHLSTETVQSIPLQNNTDSPDANENELDYSEKTDGFTISVETGEKAPDVDSSDISQ
SLLKNSTGNNVVGEIKHEEAVQNLQESVKPVASSTPKHYAKEQKFTSLGTAMKPEMEPTD
EHEEASNDKGDLQAYSCNPESPIPQSKESNTLSENVVELFAEAASVVQDKRLLEDKSQQE
VQEHTCIHPETGKVVDMLSSQQPSTNDDEKRQEKMYVMGDDPNSTESTEDTKRKIEELQN
EICSLKHVIEVRENKLVEVSKENIDLQETCAVLRSQLKQAEDAFREEDEEIEEVRKEFTV
RVAATEKKFQAAAKERDQLRALLEETENSLSSKNEQQSEEFTTLLKEKDDQISQLLEEGE
KLSKQQLQSNNIVKKLRSKEKENDALIKKNSKLLEEMTAENTRLTEILKVKEETERKQAD
AITQLNSYVEKQDTQVSKLKSELDDSAEKIRSMQAALDNAYKQLADLHKENASKDSAVQE
AALSAEMTAKEGLRIAMEKKERQFKSETEALEFQISDLQTGLRRAEQQASRREDNLRQEI
SDLQQRLQEAEARNQELTESVSYATRPLLRQIENLQSSYGNHTQTWERVERNLTERLNEA
QVQLAEAQEKERVATEHALELNSRLTAVESQLATYRQDKSRLEATLEMERTRLETAEEAR
SRETAKIEALEIKYRKMMEDNNLEKALLEQQLAVEKGKMETEKKKFQHAMEEKERSLLRQ
SSISGAPPSPTARDDSSQDENPVTSPHRPRQGSTSSVIDGISRGIMGAGTAMVERLQAQV
KQKDGEILLLQEEITTLQKTRDAVTEELATLTSKMESLEEDSRLLADLQTRYKELEQRHN
AVLQMYGEKAEQAEELKMDLEDVKSMYKQQIQELLGAAR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtttgatccttcggggttttcatctttcgctaaaacagctttatctcaagca
caaaaatccatcgacagggttttggatatcgaacaagatgaaacaaacagtgccgcttca
aaatcttcggcctcaagtgcaccaaagtcttccccatcattgtcctcaggcacgtcttca
aaggataatttaacacgtaaaaaatcatcttctgctttatctgggcattctgcctcaaaa
tcagcaaggaaaacatcttcagatgtggacaattcaaaggatggtgaaagtgatgggaat
tcattttggtcatccttccttggcgattccttttcctcagctgcaacagaatccaaaaca
tcaaatcgtagagctagtggacagaaacttggttcccgaataagtggtggaaaaatgaaa
aacagtgttgacagacaggacagtgaggatgctaaaatattgaaagatgaagacaatttg
ccaagagcattaaaacatcagagtaagaagaacagtgtgactgacactagtacaagatca
agtgagcaatcccaagcaccccagacttcattacctgtgagggaagatttggcaaatgtt
gggtgggacatttctgaaccggataaaaatagcactgtggctgtcaattttcaagaggct
aaggaacttacagaaagtcctggaaagggagagttgaatacacacaagtcacctgttatg
cctgctctaagagggagcaaattgaaatcacagcaatcaaaacgttcatctaccagtaag
agtagaaaagagaataaagaagtacttagcactgaaaataatgtgtgcaagaacaatatt
gaaaatgttgagcaagatgcattgattgttgaacatgacaaaacacctgatgataaatca
gagtctgtgaatgaacaccttagtacagaaactgtgcagtctattccacttcaaaataat
acagattcacctgatgcaaatgagaatgaactggactattctgaaaagacagatggtttt
actatctcagttgaaactggtgaaaaagctcctgatgtggatagctccgacatttctcag
tcattgcttaaaaattcaacaggaaacaatgttgtgggagaaattaaacatgaggaagct
gtacaaaatctacaagaaagtgttaaacctgtggctagttcaacaccaaaacactatgct
aaggagcagaaattcacatcactaggtacagcaatgaaacctgaaatggaacctactgat
gaacacgaagaagcttcaaatgacaagggagacctacaagcatattcatgtaatccagaa
tctccaattccgcagagcaaagaaagcaacacattgtcagaaaatgtagtagaattgttt
gcagaagctgcatctgttgttcaagataaaagattgttggaggacaaatcacaacaggaa
gttcaagaacatacttgcatacatcctgaaacaggaaaggtggtcgatatgttgtcatca
caacagccaagtacaaatgatgatgaaaaaaggcaagagaagatgtatgtgatgggagat
gatcctaattctactgaaagcacagaagacacaaagaggaaaatagaagagctgcaaaat
gaaatttgtagcctcaagcatgtgattgaagtacgtgagaataagctggttgaagttagc
aaagaaaatattgaccttcaagaaacatgtgctgtactgaggagtcagctgaaacaagct
gaagatgcatttagggaagaggatgaggaaattgaggaagtgagaaaagagttcactgtt
cgagttgctgccacagagaagaaatttcaagctgcggcaaaggaacgggatcagttaagg
gcacttttagaagagactgaaaattctttgtcctcaaagaatgagcagcaatctgaagag
tttacaaccctactcaaggaaaaagatgatcaaatttctcagttactagaagaaggtgaa
aaattgtctaaacagcaacttcaaagcaacaatattgtcaagaaactgagaagtaaggaa
aaggagaatgatgcactgatcaagaaaaatagcaaattattggaggaaatgacagctgaa
aataccagactgactgaaatcctgaaggttaaggaagaaacagagagaaaacaagcagat
gccataacgcaactcaatagctatgttgaaaagcaagacacacaagttagcaaactgaag
tctgaattagatgattcagcggagaagattagaagtatgcaagctgcactggacaatgct
tacaagcaattggcagacctacacaaagaaaatgcttctaaagatagcgcagtacaggaa
gctgctctcagtgctgaaatgactgcaaaggaaggtctacggattgcaatggagaaaaaa
gaaagacagtttaagagtgaaacggaggcattagaattccagatcagtgaccttcaaact
ggactgcgtcgggctgaacagcaggccagtagaagagaagacaatctacgtcaagaaata
agtgatctacaacagaggttacaggaagcagaagctcgtaaccaggaactcactgaaagt
gtctcttacgcaacaagaccactattaaggcagattgagaacctacagagcagctatgga
aatcacacgcaaacttgggaaagagtggagaggaatttaacggagaggcttaatgaggct
caggttcaactagccgaggcccaggaaaaggagcgcgtagccacagaacatgcgctggag
ttgaactcccgcttgacagctgtggagtcacagctggcgacataccgacaagacaagtca
cgactggaggctacattggagatggaacgaacgagactggaaactgctgaggaagcgaga
agcagggaaactgctaagatagaggcattggagattaaatacagaaaaatgatggaggat
aacaacttggagaaggctttacttgaacaacaactcgccgtagagaaaggcaaaatggaa
acagaaaagaagaagtttcaacacgccatggaagagaaagagagaagtttacttcgacaa
tctagtatttcaggagcacctccctctcccacggccagggacgactcttcgcaggacgaa
aatcccgttacctcccctcacaggccacgacagggtagcaccagtagtgttattgatggc
atatcgaggggaatcatgggagctggcaccgccatggtcgagagactgcaggctcaggtc
aaacaaaaagatggcgaaattctacttttacaggaagagataactacgctacaaaaaaca
cgcgatgccgtcacagaagaactagcgacactcacttcgaaaatggagagtctggaggaa
gatagtagacttttagctgacctacaaacacgatacaaggagcttgaacaacgtcataac
gccgtgcttcaaatgtacggtgagaaagctgagcaggctgaagaactgaaaatggacttg
gaagatgtcaaatccatgtataaacaacagattcaggaactcctgggagccgcaagatga
DBGET
integrated database retrieval system
