Pocillopora damicornis (lace coral): 113680368
Help
Entry
113680368 CDS
T05773
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdam03036
]
113680368
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113680368
Meiosis-specific proteins
Cohesin complex and associated proteins
113680368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
TSC21
TMPIT
Motif
Other DBs
NCBI-GeneID:
113680368
NCBI-ProteinID:
XP_027053193
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MGYLQRLELENFKSYKGKHTIGPFKRFTAVIGPNGCGKSNLMDAISFVFGERTQSLRVRT
VKDLIHGAPIGKAVSSTAMVTAVYAEEDGTEINFTRKIVGSGTEYRIDNKVVTPQQYTSK
LESLGILVKAKNFLVFQGTVESIAMKTPKERTQMFEKISRSGELSDDYDKKKVDMQKAEE
ETSFNYHKKKGIAAEKREAKAEKEEADKYHKLNQELESCQLEVKLFQLYHNEQSINHLTS
ELKAKSRDLDKLDQRKNEIDQQLKSKKQDSAKLSREMAFVEKKITSKEAELNKNRPQYIK
AKEKTSHVLKRLESSKKAFDKAKNVHKKHEAEIRELEHDLDEVRNAAAKYEEDVSGASQD
ENVELMDSQVEQYHALKEQAGRETAALKLQLDKIVREQNSEQEFLDQLKQKKVDLLAQQK
HKTDQRTQLTERIEKLDEYISTNIQTVDKLRQDHDKMEKDINDANSRHSEISQLLEGVQG
ELNEAKMDKHESARHQKKQELLESMKRLFPGVYGRLIDLCEPVHKKYTLAITRVLGRNMD
AIVVDTEKTGKDCIQYLREQRADPEMFLPLDSIQVKPINEKLRQIGGTAKLVIDVIRYNP
PVVKKALQFACANALVCDGMEEARKLAFGGAERKKTVSLDGTLFQKSGVISGGVSDLKAK
ARRWDEKQVEGMKKKRDSYLAELKDLSKHRRKEPELQNLRSQIDGLEHRLRYSTKDKETT
EKQTLGEISKELKIIKKELDSLEPKREKLLLSMAKRSEEITNTEKRMNRVEDQVFRGFCE
QINVENIRQYEEKQLKARLERDQRRLEFNNQESRLINQLEYEKGRDTKGQLKKLEESMAA
DELEIEKLRGEEKEKLKLIEKDTTELEKLRLEKSAKKSQIDEKDLEIKEVKKSFMHHMKD
VTTHQKQITAMETQLEQKRADRHSLLKSCKMEDIFLPFKKGGMNDIDLGEPSSSQPEMSS
QDRGESSSMEIDSTSTQGAKITYEREANLIIDYSSLGRSLKQLEDPSEIRNTMNELANKV
NKLQATLQRIQAPNMKALEKLDGVSSRFQETSAEFEQARNKARKAKIEFETVKKNRYDRF
MDAFEHVSQRIDDIYKELANNPSAQAFLGPEDAEEPYLGGINYNCVAPGKRFRPMDNLSG
GEKTVAALALLFSIHSYQPAPFFVLDEIDAALDNTNINKVARYIINETREHFQCIVISLK
EEFYTRAEALIGITAEPDKDCTVSRVFTLDLTQYPE
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttacaacggctggagttagaaaattttaagtcctataaaggaaaacatact
attggacctttcaagcgtttcacagctgttattggacctaatggatgcggcaagtctaat
ttaatggatgctatcagttttgtatttggagaacgcacacaaagtcttagagttcgtact
gttaaggatctcattcatggagctcctattggcaaagctgtatccagtacagcaatggtt
actgctgtttatgcagaggaagatggaactgagataaactttacaaggaagattgttggt
agtggcactgagtacagaattgataacaaagttgtcaccccacagcagtacacttcaaaa
cttgaaagtttgggaatattggtaaaagccaagaattttcttgtgtttcaggggactgtt
gaatcgattgccatgaaaactccgaaagagagaactcagatgtttgaaaaaatcagcaga
tcaggtgagctttcagacgattatgacaaaaagaaagtagacatgcagaaggctgaagaa
gagacaagttttaattaccataaaaagaagggaattgcagcagagaaaagagaggccaaa
gctgagaaggaagaagctgacaaataccacaagctgaatcaagaactggaaagttgtcaa
cttgaagttaagttgttccagttgtatcacaatgaacaaagtataaatcacttaactagt
gaactgaaagctaaatctcgtgacttggacaaacttgaccaaaggaaaaatgaaattgac
cagcagctcaagagtaagaaacaagacagcgctaagttatcaagggagatggcttttgta
gagaagaaaataactagcaaggaagcagaactgaacaagaacagaccacagtatattaaa
gccaaggagaaaacttctcatgttttgaagcggcttgaatcttctaagaaagcttttgac
aaagccaagaatgttcataaaaagcatgaagctgaaatcagggagcttgagcatgatttg
gatgaggttcgcaatgcagcagcaaagtatgaggaagatgtgtcaggagcaagtcaagat
gaaaatgtggaactgatggattcacaggttgaacaatatcatgcattaaaggaacaggct
gggagggagactgcagcccttaagctacagttagacaagattgtgagagagcagaactct
gaacaggaattcctagaccagttaaaacagaaaaaggtggatcttcttgctcagcagaaa
cataagacagatcaaaggactcaactcacagagagaattgaaaaacttgatgaatatatt
agcacgaacatacaaacagtggataagttgaggcaagatcatgacaaaatggaaaaggac
atcaatgatgccaactctcgtcatagcgaaataagtcaacttcttgaaggtgtacaggga
gaattaaatgaagccaaaatggacaaacatgaaagtgctagacatcaaaagaagcaagaa
cttttggagagcatgaagagactcttcccaggggtttatggacgacttatagatctctgt
gaaccagtccacaaaaagtatacacttgcaataacaagggtccttggaagaaacatggat
gccattgttgtggatacagaaaaaactggaaaagactgcattcaatatttaagagaacag
cgagctgatcctgagatgttccttcctctggacagcattcaagtaaagcctatcaatgaa
aagttgaggcagattggtggtactgctaagctagtcattgatgtaattagatacaaccca
ccagttgtcaagaaagcattgcagtttgcttgtgcaaatgcccttgtctgtgatggaatg
gaggaagcaagaaagcttgcatttggtggtgcagagagaaagaagacagtctccttagat
ggaacacttttccaaaagtctggtgtaatttctggtggagtaagtgatctaaaggcaaag
gctagacggtgggatgagaagcaagttgagggaatgaagaaaaaacgtgacagctatttg
gcagaattaaaagatcttagcaaacaccgtaggaaagagccagaactgcagaacctgaga
tctcagattgatgggcttgaacacagactgagatactctactaaggataaagaaactaca
gaaaaacaaactcttggagaaatttctaaggagctgaagatcataaagaaagaactagac
agcctggagccgaagagagagaagttgcttctttcaatggccaagaggagtgaagaaatc
acaaatactgagaaaagaatgaacagagtggaggaccaggttttcagaggattttgtgag
caaataaatgtggagaacataaggcaatatgaagaaaaacaacttaaagcacggctagag
agggatcaacgccgcctagagtttaacaaccaggagtcacgcctcataaatcagttggag
tatgagaaaggaagagataccaaaggtcaactaaaaaaactggaggaaagcatggcagct
gatgaattagagattgaaaaactcagaggagaggaaaaggagaaactgaagttaattgag
aaagacacaacagagctggaaaagctgcgtttggaaaaatcagcaaagaagtctcagata
gatgagaaggatctggaaataaaggaagtcaagaaaagctttatgcatcacatgaaggat
gttacaactcatcaaaaacaaatcactgccatggaaactcagttggagcaaaagagagca
gatcgtcacagtctcttaaagtcatgcaagatggaagacatcttccttcccttcaaaaag
ggaggaatgaatgatattgatcttggagaaccttcaagtagtcagccagaaatgtcaagt
caggaccgaggagaatcatcatcaatggaaattgacagcacaagcacacagggggccaag
atcacttatgagagggaggccaatctaattattgactactcttcacttggtcgaagctta
aagcagcttgaagacccatcagaaatccgtaacacaatgaatgagctggcaaacaaggtg
aacaagctgcaggcaactttacagaggatacaggctccaaatatgaaggcacttgagaaa
ttggatggagtaagtagtcgatttcaagagacaagtgctgagtttgagcaagcacgaaac
aaagcaagaaaggccaagattgagtttgaaactgtcaaaaaaaataggtatgaccggttt
atggatgcatttgaacatgtttcacaaagaatagatgacatatacaaggagttggccaat
aatcctagtgcccaagcattccttggaccagaggatgcagaggaaccctatcttggagga
atcaattacaactgtgtagcaccagggaaaaggtttcgaccaatggataatttatcaggt
ggagagaagactgttgctgcacttgctcttctcttcagtattcacagctaccagcctgcc
ccattctttgttttggatgaaatagatgcagccctggacaacactaacatcaacaaggtt
gcaaggtacattattaatgaaaccagagagcattttcagtgcattgtgatttcacttaaa
gaagagttctacacaagagctgaagctcttattggaatcactgcggagcctgataaggac
tgtacagtgagtcgggtgtttactttggacttgactcagtatcctgagtag
DBGET
integrated database retrieval system
