KEGG   Pocillopora damicornis (lace coral): 113680519
Entry
113680519         CDS       T05773                                 
Name
(RefSeq) DNA ligase 3-like isoform X1
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    113680519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pdam03400]
    113680519
Enzymes [BR:pdam01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     113680519
DNA repair and recombination proteins [BR:pdam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     113680519
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C zf-CCHH BRCT_2 RNA_ligase BRCT mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 113680519
NCBI-ProteinID: XP_027053351
LinkDB
Position
Unknown
AA seq 958 aa
MFGISRRSIQLVKENSTLYHRRIVLALNIMADGAEDKPFLVEYAAQGRAKCKTCKQQIEK
SVTRIGKLVSNPFGEDGGMMKQWYHVPCIFDTLSRARATTKKIDSTDDLGGFENLKDDDQ
AKILSLIKDLAVKMSSPKKKAVQSTLPYGKPKPSTPSKVGPADGKKSSSSGSGSHSSSPL
KGETDEHSKDNSFHEFRRICINLAEEPSYNNKSKILSEFFAKGSSGDGFTGDLTLWVKTL
LPAVNKRVYNLQSKQLVKLYSQIFGCSQDDMITDLEQGDVSETLSTFFQSSSLLKPLKKS
LISLLEVDAFLDKLKTLTKEDDQQRELTKMTRRCSANDLKFIIRLIKHDLRMNTGAKHVL
DAIDPNAYEAFQASNNLTDVVQRCLQKKESNAGVLPGMSKKLSIKASLMTPVKPMLAEAC
KSFSQALKKCPKGMYAEIKYDGERVQVHKSGNEFQFFSRSLKPVLAHKVAPIKDHLPKAC
PHGNSLILDSEVLLVDNKTSKPLPFGTLGIHKKSAFKDASVCLFIFDCLQFNDENMMKKS
MTERRKVLEQNVTVIPNKIMLSEMNFLKTEKELSKLMTRAIKEGLEGLVLKDINGIYEPG
KRHWLKMKRDYLEEGAMADTADLVVLGAYYGTGNKGGLMSIFLMGVWDPATKQWCTVARC
GNGHDDKTLERLNRELKMKKISKDPSKVPLWLNIHRTLVPDFVVEDPKKSPVWEITGAEF
SKSTTHTADGISIRFPRVTRIRDDKDWQTANDLPHLKVLFKNSRASTNVADLVDNDDDDN
ADDDDDATDDDHDPPTKDKEMKNESPSKESNETEKITRKRKTLDYQENSSPGKRAKSACK
YGSKCYQKSEDHLQKFSHPQNDNGDESSPSKNKTLKDIFQGLTIFLANDLEDSAKLRRYI
IAYDGDVVDEFEKTTASHIVSNTKGGHTMDRPVKLISPSWIWKCIKKGHLVPENKFAL
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgtttgggatttcaagacgtagcatacagcttgtcaaggaaaactcaaccctgtaccat
cgacggattgtcttagctctgaacatcatggcggacggcgcggaagacaagccatttttg
gtggagtatgctgcacagggaagagctaaatgcaaaacttgcaagcaacagatagagaag
agtgtgactcgaataggaaagctggtttcgaatccattcggcgaggacggtgggatgatg
aaacaatggtaccacgttccttgcattttcgatactctgtcccgggcccgtgccacaacg
aagaaaattgacagcactgatgatttgggcggatttgagaacctcaaggatgatgatcag
gcgaaaattttaagcctcattaaagatctagctgtcaaaatgtcttcacctaaaaagaaa
gctgtacagtcaactcttccatatggaaaaccaaaaccctcaactccatcaaaggttggt
ccagcagatggtaaaaagtcttcaagctctggcagtggaagtcacagctcatcacctctc
aagggggaaactgatgaacacagtaaagacaacagttttcacgaattccggagaatctgc
ataaatctggctgaagaaccaagctataataacaagagcaagatcttgtctgaattcttt
gcaaaggggagctctggagatggatttacaggagacttgacactgtgggtgaaaacacta
ctgcctgcagtcaacaagagagtgtacaacttgcaaagcaaacaactcgttaaattatac
agtcagatttttggatgtagccaagatgacatgataacagacttagagcagggtgatgta
tcagagactttgagcacattttttcagagcagttcactgctaaaacctctaaagaagagt
ttgatttcattactagaggttgatgcgtttcttgataaattgaaaactctgacaaaggaa
gatgatcaacagagggaactcactaagatgacaagaagatgctctgcaaatgacttgaaa
ttcatcattcgtcttatcaagcatgacctgcgaatgaacacaggagcaaaacatgtctta
gatgcaatcgacccaaatgcatatgaggcgtttcaggcatcaaacaacctcacagatgtt
gtacagcgatgcctacagaaaaaggaatcaaatgcaggtgttttgccaggaatgagtaaa
aaactgagtattaaagcttccttgatgacacctgtcaaacctatgctggcagaagcttgt
aagagtttttcacaggcattgaagaaatgtcccaagggaatgtatgcggagattaaatat
gatggagagagagtccaagttcacaagagtggtaatgagtttcagtttttcagccgcagc
ctcaaacctgtccttgcacataaggtagcacccataaaagatcatcttccaaaagcttgt
cctcatggtaacagtctcatattggatagtgaggtgttacttgttgacaacaaaacaagc
aaacctctcccttttggaactctaggcattcacaagaaatcggctttcaaagatgccagt
gtctgtttgtttatttttgattgcctccagtttaatgacgagaacatgatgaaaaagagc
atgacagaaagacggaaagtcttggaacaaaatgtcacggtcatcccaaacaaaataatg
ttatcagaaatgaatttcctaaagacagaaaaagaactctcaaagttgatgacgcgtgcc
atcaaagaaggcctcgagggactggtactgaaggatatcaatggtatttatgaaccagga
aaaaggcattggctcaagatgaaaagggattatctcgaggaaggtgctatggcagatact
gctgacctggttgtactaggggcctactatggaacaggcaacaaaggtggattgatgtcg
atctttcttatgggtgtctgggatccagccacaaagcaatggtgtactgtggctaggtgt
ggcaatggtcatgatgataaaaccttagagcggcttaatagggaactgaaaatgaagaaa
atcagcaaggacccttctaaagttcctctatggttgaacatacaccgaactttagttcct
gactttgtcgtcgaagatccaaagaaatccccagtgtgggagataactggggcagaattc
agcaaatcaacgacgcatactgctgatggtatatcgatcagatttccacgagtaacgcgg
atcagagacgacaaggattggcaaactgcaaacgatctacctcatctgaaggttttgttc
aagaactcgagagcttcaaccaatgtggctgaccttgtggacaatgacgatgatgataat
gctgatgatgatgatgatgcaactgacgatgatcacgatcctccaactaaggacaaggag
atgaaaaacgaaagcccttccaaggaatcaaacgagactgaaaaaataacaaggaagaga
aaaacacttgactatcaagaaaatagttctcctggtaaacgggccaagtcagcctgtaag
tacggatcgaaatgttatcagaagagtgaagatcatttgcagaaattcagccatccgcag
aatgacaatggcgatgaatctagtccaagcaagaataagactctgaaagatatctttcaa
gggctgaccatatttctcgcaaacgatcttgaagattctgcgaaactcagaagatacatc
attgcttacgacggagatgtagtcgatgagttcgaaaagacgactgcaagccatattgtg
agcaacactaagggtggtcatacgatggatcgaccagtcaaactgatttcaccatcctgg
atttggaaatgcatcaagaagggacaccttgtgcctgaaaataaatttgcactctaa

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