KEGG   Pocillopora damicornis (lace coral): 113680637
Entry
113680637         CDS       T05773                                 
Name
(RefSeq) nucleoporin NUP188 homolog
  KO
K14311  nuclear pore complex protein Nup188
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113680637
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pdam03019]
    113680637
Messenger RNA biogenesis [BR:pdam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113680637
SSDB
Motif
Pfam: Nup188_N-subdom_III Nup188_N
Other DBs
NCBI-GeneID: 113680637
NCBI-ProteinID: XP_027053472
LinkDB
Position
Unknown
AA seq 1758 aa
MTSIEISNRGLWHIITGRSSLQEPDQIGEELKRKKDRLLLGTADYKEPSPQSAEALRKSP
NIKPKRKEFVLKLSKFLNLDEWKSLQLFGSYLENDFRGSKQQLLEMLKNEAQTEALLLKI
MEYYFEERLHILQCTKFLLSYWQDPRHQWREEFAECIEAMQENDVLIMKILEQYKTSCST
TVPLHATAGSSLHLKTKCQRWALQFLREQILLLEIMFLYYKEFVVPAKSLLDLAKLFQSQ
SFGLKQVNRQLFEGQAEVLLPHISYLQVLVLIVSLDLESLRKLIEEDSCSRHHLLQEKAS
LEALDKFFLSCGDQPHHGPVMLAWAAFRYVTIDASQEQFVRRIGGKALQCSVFKYLLGML
RSEEFSTNDVVSNTCKSLIYGLMVIVLALFDEDTLGELPLLVSVLSQTLTEKGLCVDFWD
LDLNTGAGLLLNSARSWFPLQFCPFVQLLKSLAGDKDSAAKVYDYLDKVTSYTELLRENQ
LSDIDCSGVNKIWRIVNPRILYQNLFSPDSKELIMPAGTCGKVAPVPEGPAIIQWSYHYS
CWKLFALEIDSFLESVGSGAAVDCQNVICIVELVNEVLLNDWDKAVYLQPLSSRLYLIIQ
RCTPSPNPPQDLIATCLTCLATVALRDPEQVWHHLQQTGFLPHYTSVKMSKSDKTKVEFL
GTAPGNFGAILSTKERPIGYYPVTMATLDFLLKLIHGMSNAEESGNRAISIIELAACLVF
IMREVFTGFYKWRFGSLRDREEIGKRCLQLFNVVLGLHFTKKMADQASDAMEAEVTDLPW
TPSVLQDTLVLGLLYSEAGQSLLNILGTGVDTVDKLVSVGSSTGGYAIALVELIKLAFSV
LNRLLARKEKDDNISPLEEALTIQVIHQLREKGASSSTSWAWYYLTKIGRFVFPVENAES
DFLVAPMSMHASFGAEAVSLRDAFVSRLRTLTEDIKLKSVILEFIATAVETQPGLIELFL
DLTNKDDKEFVIGQNSCLHAVLDIIDPEKQAGHHIPAELVSAAFYLLHSLWHDRRDAALM
AVRMSPKFWEKLTRPLITGIESHVDEDYRYHMEISCYAMQIIALEAYYVSRGQIDDSLKT
SLKAFCSENRYQYWGQFLKSLDQSMDDDQEKQFEEEKLKLLKAWRTYLVVCSSFQNEIFG
LNDTRRRRLILEDTLQALKSQVSRVVAVESINASVELSSLYLMLLKRWKSCLRDPNPVFQ
CLVDVIDTAHKNDTQLFVHIRVAMFSSFSVLLQHARTENLSDTLLSSHALVLLPLACEPL
EYLRGRFSSEQKQQDRVLELSVFIIDEILNILLANPGQWLPVLREHALFASLVQALDVCI
KTHEKVEFTEAILHLFLSLSRIPMSAEALAMNSISQPLCLGLASLTYSEGTPQASRPKSG
PQSQVSSHNSDKSSQRSWDKVWQLSLAVMASMLRTLRHGFLKDALDFAGVHRERLAEALN
SVSRSQSSDVLAEAEEVTAFLLELAHFFHEWRFTLPDVLILLQSRIGVLCQSCIALLTHP
RLLAHLLEVSKGRASSSAHGKASTPDVQLSLSQTFSREMLRTYSYADDDSFRNSPLVSQT
QSQLLKILCNSLAMLRQFTPDICGILIDQGMDLEEFPPLLSLGFSSPTVDTEEPLSFGTL
LACLNMALSNLGPADMKSPVKSPVRTLSESLPRSLLMFTMENALIIALSQACRYLRDPGL
DLRVKQFLKRELGSELGNFLGGLFRHFARRGLPPSPAGTQTSPSSAARRTPTKALAFTEA
PEQKFFKLADTFVKQVLR
NT seq 5277 nt   +upstreamnt  +downstreamnt
atgacttccattgaaatatctaatcgtgggctatggcacattataaccggacgatcttcc
ttgcaagagccggatcagattggagaagaacttaaacggaagaaggatcgtttactgcta
ggaaccgctgactataaagaaccaagtcctcagtctgctgaagctcttcgaaagtcacca
aatattaaaccaaaacgaaaggaatttgttttgaaacttagtaaatttttgaatcttgat
gaatggaagagtttacagttgtttggcagctacttggagaatgactttagaggctctaaa
caacagctcctggaaatgttgaaaaatgaagctcaaacagaggcacttttgctgaagatc
atggagtactactttgaagaacgtttacacatcttacagtgcactaagtttttgttgagc
tactggcaagaccctagacatcaatggcgagaagaatttgcagagtgcatcgaagctatg
caggaaaatgatgttttgattatgaagattttggaacagtacaagacttcttgttctacc
acagttcctcttcatgctactgcaggatcatcacttcatctgaagacaaaatgtcagcga
tgggccttacagtttttaagagaacagatactgcttctggaaatcatgttcctctattat
aaggaatttgttgttccagccaagtccctgctagacttagcaaaactatttcagagccag
agttttggattgaagcaagtcaatagacagctttttgaaggacaggctgaggtcttactt
cctcatatcagttacctgcaggtgttggttctcatagtttcacttgacttagagagttta
aggaaattaatagaagaggacagctgttcacggcatcatttactccaggagaaagcctca
cttgaggctctagataagttttttcttagctgcggagatcagcctcaccatggacctgtc
atgttggcctgggcagcgtttagatatgttactatagatgccagtcaagaacagtttgta
agaagaattggtggaaaagcattgcaatgttctgtgttcaaatatttacttgggatgtta
agaagtgaggaattctctacaaatgatgttgtgtctaacacttgcaagagccttatatat
ggactgatggtgatagtgctggcactgtttgatgaggatacactgggagagctaccactg
ttggtctctgttttgtcacaaactcttactgagaaaggtctttgtgtggatttctgggat
ttggacttgaatacaggtgctggtctccttttgaattcagccagaagttggtttccactc
cagttttgtccatttgtgcaacttctgaaatccctagctggtgacaaggattctgcagct
aaggtttatgactatttggacaaagtgacatcatacactgagttgctgagagaaaaccag
ctgagtgacatagactgttctggtgttaataagatctggaggattgttaatccaagaatc
ctctatcagaatttgtttagtccagattcaaaagaactcattatgcctgctggcacatgc
ggaaaagttgctcctgtacctgaaggacctgctataatacaatggagttatcactattcc
tgctggaaactttttgcattggaaattgattcattccttgaatctgtgggatctggagca
gctgtggattgtcaaaatgtcatttgtattgtggagttagtcaatgaggtcctactcaat
gactgggacaaggctgtttatctccagcctctctcttcccgtctgtatctgattattcag
aggtgtacaccatcaccaaaccctccccaagatttgattgccacatgtttgacatgctta
gctactgttgctttgagagatccagaacaggtgtggcatcatcttcaacagacagggttc
cttcctcactacacttcagtcaaaatgtcgaagtcagacaaaaccaaagtggagttcctt
ggcacagcaccaggaaacttcggtgcaattttaagcactaaagagaggccaattggttat
taccctgtcaccatggcaacattggattttcttttgaagctgattcatggaatgagtaat
gctgaggaatctggaaatcgggcaattagtattatcgagcttgctgcctgtctagttttc
ataatgagagaggtgttcacaggattttacaaatggagatttggtagcctgagggacaga
gaagaaattgggaagagatgtcttcagttgttcaatgttgttcttggccttcacttcaca
aaaaaaatggctgatcaagccagtgatgcaatggaagctgaagtcacagatttgccatgg
actccatcagttttacaggacaccttagttcttggtttgttgtactcagaagctggacag
tcactactaaacattcttggcacaggggtggatactgttgataaacttgtgtctgtggga
agttctacaggtggatatgccatagcccttgttgaactgatcaagctggcattttctgtg
ctgaacagactcttggctagaaaagaaaaggatgataacatctctcctctggaagaagca
ctgacaatacaagtgattcatcaactgagggaaaaaggagcaagctcttccacaagctgg
gcttggtattatttaacaaaaattggtagatttgtcttcccagtggaaaatgcagagagt
gattttttagtggctcccatgtcaatgcatgcaagttttggtgctgaagctgtttctctg
agagacgcttttgtgtcaagattaaggactcttactgaggatatcaaactcaaatcagtt
atactggagtttatagcaacagctgttgaaacacaacctggactgattgagctctttctt
gatttgacgaataaagatgacaaggaatttgtcattggacagaatagctgtcttcatgca
gttttagatattatagaccctgagaaacaggcaggtcaccacattcccgctgagctagtt
tcagcagcattctatttacttcactctctgtggcatgacagaagggatgctgctcttatg
gcagtaagaatgagtccaaagttttgggagaagttaactcgaccattaataacaggaata
gaatcacatgtagacgaggattacagatatcacatggaaataagttgttatgccatgcag
ataattgcattagaagcttactatgtctcaagaggtcaaattgacgacagtctgaagaca
tccttgaaagctttctgttcggagaacagatatcagtactggggtcagtttctcaagtct
ttggatcaatctatggacgatgatcaagaaaaacagtttgaagaagaaaaactcaaactg
ctcaaagcctggagaacatatttagttgtttgttcttcttttcagaatgagatatttggt
ctaaacgatactcgtcgaagaagattaatcttggaggatactcttcaggcgctcaagtcc
caggtttccagagttgtagccgtagagagtataaatgcgtctgttgaactgagtagtctt
tatctgatgctgctcaagaggtggaagagctgtcttcgggatcccaatccagtgttccag
tgcttggtggatgtcattgacactgcgcacaagaatgacacacagttatttgtccatatc
cgtgtggccatgttctcgtccttctcagttctgcttcagcacgccaggactgaaaactta
tccgacacgttactgagcagtcatgcgttggttcttttaccgctggcttgtgaaccactg
gaatacttaagaggaagattctcgagcgaacagaagcaacaagatagggttcttgaactg
tctgtgttcatcatcgatgaaattctgaacattctgctcgccaaccctggtcagtggctt
cctgtgttgagagagcatgcgctgtttgcgtctctggttcaggccctggatgtgtgtatt
aagacgcacgagaaagtagaattcaccgaagccattcttcacttgttcctgtcgctgtca
agaataccaatgagtgctgaggccctggccatgaatagtatatcccaaccactttgccta
ggattggcttcgctgacttactctgaaggcacaccacaggcttctcggcccaaatctggt
ccccagtctcaggtatcctctcacaactcggacaaaagtagccaacgaagctgggataaa
gtgtggcagctttccctcgctgtgatggcgtccatgctgcgcacactcagacatggtttt
ctcaaagatgcactagactttgcaggagtacacagagaaagactcgcagaggccctgaac
tctgtgagccggtctcagtcttcagacgttttggcggaagcagaggaagtgactgctttc
ttactggaacttgctcatttttttcacgaatggagattcactctgccagatgtgttaata
ctacttcagagccgtattggtgttctttgccaaagttgcatagctctgctgactcaccca
agattgcttgctcatttgcttgaggtgtccaaagggcgtgcaagctcaagtgcacacggg
aaagcctcgacaccagatgtgcagctctcgctgagccaaaccttctccagagaaatgctc
agaacatactcatacgcagatgatgactcttttagaaacagccctcttgtctctcaaact
cagtcacagttgttgaagattctctgcaactcactggcgatgctgcggcaatttactccg
gacatttgtggtattctcatagatcagggtatggatcttgaggaattccccccgctgctt
tctctcgggttcagttccccgactgtggacactgaagagccgttgtcgtttggtactctc
ttggcctgcctcaatatggccctctccaatcttggcccagctgacatgaagtcacctgtg
aaatcaccagtccgaactctgtcggagtcattaccgagatctcttctgatgttcactatg
gagaatgcgttgatcatcgctctatctcaggcttgtcgatacttgcgggatcccggactg
gacctgcgggtcaagcaatttctaaagagagaacttggtagtgaactgggtaattttctt
ggaggtctcttccgtcactttgccagacgtggtcttccaccatcaccagcgggcactcag
accagtcccagcagcgcagcaaggaggacaccgactaaggctctggctttcaccgaagca
cctgaacagaagttctttaaactggctgatacctttgtgaagcaagttttaagataa

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