Pocillopora damicornis (lace coral): 113680730
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Entry
113680730 CDS
T05773
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04140
Autophagy - animal
pdam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113680730
04148 Efferocytosis
113680730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113680730
Membrane trafficking [BR:
pdam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113680730
Hops complex
113680730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_11
zf-RING_5
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-C3HC4
zf-RING_16
Lact-deh-memb
zf_RING_Vps8
zf-rbx1
WD40_CDC20-Fz
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
113680730
NCBI-ProteinID:
XP_027053569
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MASILDQYMQASAGENLNPFLGPDVTEPISTGYVEVKSEDDVPIFRRQKINFRPPSNIVD
VVVCNNMVAIALSNNVLMRLDLTNPSEIDSVDITKRMDDSVHRIFMDPTARHLIVCMKSQ
ESFYLARNSKKPKPLAKMKGHLINAIAWNKSKLTESSTQTILLGTTKGLVFETELEPEEK
FFQGGLEKFWKQLYNVNSSGGPEEPIYGIMFEKFPVSPKSDRKYFVMVSTLSRLYQFIGD
VTVTDSLDLQPLFAEYESNPAPFLEMPGHLDSSELALFYPKIRGLPNSFAWLTGSGVYFG
KLDFGPPESWDNITAETRLLQYGFEEGKETTPPLSIGLTGFHALMLHKDKFQAVSLLSEQ
VVFEDQFPPRYGAMRGLFIDTVKKTLWIFSDSAIFQYHVTRESRDVWKMYLERGEFELAK
EYCRDNPANLDKVLTKQAEELFESKSYANAARCYAQTQVSFEEVALKFIQVEESQALRMF
LLKKLDSMKHQDKTQMTMLIMWLIELYLNDLGGLKEENAKLKYEGLQEEFRKFLAQTKVK
TCLDQNRKTAYDLISSHGDVENLIFFAMFMQDFEHVISHHIQHDDFMAALDVLTKQTDTE
LYYKFSPVLMQHIPRQTVNAWTEQKKKKLDPRRLIPALVHYHQQGKSTQTEEAIRYLEFC
IERLGNRDQAIHNYLLSLYIEQEDDESLLRYLQMQGQDPEEVCYDMKYALRLCSEHDKQK
ACVHIYSTMGLFEEAVDLSLKVDVDLAKIQAQKPPEDDEVLRKKLWLRIARHVVEEEGDV
KKAMEFLNQSELLKIEDILPFFQDFVTIDHFKDAICSSLHEYNQHIEELKSEMQEATESA
KTIRGDIHEMRNKYRVVPAQEKCSICLYPLLTRGFYVFPCHHSFHSDCLKNEILPHLKEK
QRAKVQDLFNQLYATSRTDSSSVSSTSRETLKNELDELIASECPFCGEIMIRSVDQPFIS
PDEYESVLESWQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccattctcgatcagtacatgcaagcttcagcgggagaaaacttgaatccgttt
ctaggaccagacgttacggaacctatatcaactggatatgtagaagttaagagtgaagat
gatgttcccatttttcggcgacagaaaatcaacttcagaccaccaagcaatatcgttgat
gttgttgtgtgtaacaatatggttgctatagcactgagtaacaatgtgctgatgagactg
gatttgacaaaccctagtgaaatagatagcgttgatatcaccaaacgaatggatgactct
gttcatagaatcttcatggatccaactgccagacatcttattgtctgcatgaagtctcaa
gagtcattctatttggccaggaattccaagaagcccaaaccattagcaaaaatgaaggga
catctgatcaatgccattgcatggaataaatcaaaactgactgagagttctacacagaca
attcttctggggacaactaaagggctggtatttgaaacagagttagagccagaggagaag
ttctttcaaggtggtcttgagaaattttggaagcaattgtacaatgtgaattcaagtggt
ggtccagaagagccgatttatggaatcatgtttgagaagtttcctgtgtctccaaaatct
gacaggaaatactttgttatggtatcaacattgagccgcctttatcagtttattggtgat
gtaacagttacagactccctggatttacagccattgtttgcagaatatgagagcaaccct
gcacctttccttgagatgccaggtcatttggattctagtgaattagctctgttttacccc
aagattaggggtctgccaaattcttttgcgtggctcacaggaagtggtgtttactttggt
aaactagactttggtccccccgagtcttgggataatatcacagcagaaacaagactatta
caatatgggtttgaggaaggaaaggaaacaacacctcctctatccattggactgacaggt
ttccatgctcttatgctgcataaagacaagtttcaggcagtatcacttctcagtgaacaa
gttgtgtttgaagatcagtttccacctcggtatggtgcaatgagaggactctttattgat
acagtgaagaagactttgtggatattctcagattcagcaatttttcagtatcatgttaca
agagagagcagggatgtctggaaaatgtaccttgaaaggggagaatttgagttggccaag
gagtattgcagggataatccagcaaatttggataaagtgttaactaaacaagctgaggaa
ctatttgaaagcaagagttacgccaatgctgccagatgctatgcccaaactcaagtatca
tttgaggaggttgccttaaagtttattcaagttgaggagagccaggcactcaggatgttt
cttttaaaaaagctagatagtatgaaacaccaggacaagacacaaatgactatgctgata
atgtggctgatcgaattgtatttgaacgacttgggaggtttaaaggaagaaaacgctaaa
ctaaagtacgaaggcttacaggaagaattcaggaagttccttgctcaaaccaaagtaaag
acatgtctcgatcaaaacaggaagacagcctatgatttgatctctagtcatggagatgta
gagaacttaatattttttgccatgtttatgcaagattttgagcatgttatcagtcatcat
attcagcatgatgactttatggctgcattggatgtcctcactaaacagacagatacggag
ctttattacaagttctctcctgtgctaatgcagcacattccgcggcaaacggtaaatgcc
tggactgaacagaaaaagaagaagctggatccacgccgactgattcctgcgctggttcac
tatcaccaacaagggaagtcaactcagaccgaggaggccatccgctacttggagttctgc
atagagagactcggaaacagagaccaggccattcacaattatttgctgtcgttatacatt
gaacaagaagatgatgagtcattattacgatacctgcaaatgcaaggacaggatccagaa
gaagtttgttatgacatgaagtacgccttgagactgtgttcagaacatgacaaacagaaa
gcctgtgttcacatctacagtaccatgggactctttgaagaagcggttgatttgtcttta
aaggtcgatgtagatcttgccaagattcaagcccagaagcccccggaggacgacgaagtg
ttgaggaaaaaactctggctcagaattgcgcgacatgtggtggaagaagaaggagatgtg
aaaaaggcaatggagtttttgaaccaaagtgaacttctaaaaattgaagatatccttcca
tttttccaggattttgttaccattgatcatttcaaggatgctatttgctcgtcacttcat
gaatacaatcaacacattgaagaactaaaaagcgaaatgcaagaagctacagaaagtgcc
aaaacgatacgaggagacatccatgaaatgagaaataaatacagggttgtaccagctcaa
gagaagtgttcgatatgcctatatccactgcttacaagaggcttctatgtgtttccctgt
catcattccttccattcagattgtctcaagaatgagattttaccacatcttaaagaaaaa
cagagggctaaggttcaagacctatttaaccagctctacgcgacgtcaagaactgattca
tcctcggtttcatcaacctcacgagaaactctcaagaatgagctggatgaactgatcgca
tcagaatgtcctttctgtggggaaattatgatcagatctgtagatcaaccctttatctca
ccagacgaatatgaaagtgtattggaaagctggcagtga
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integrated database retrieval system
