Pocillopora damicornis (lace coral): 113681123
Help
Entry
113681123 CDS
T05773
Name
(RefSeq) patched domain-containing protein 3-like
Organism
pdam
Pocillopora damicornis (lace coral)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
ACR_tran
NPC1_MLD
Effector_1
Motif
Other DBs
NCBI-GeneID:
113681123
NCBI-ProteinID:
XP_027053997
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MSGSIANQPFLEEQNGVIHTAKGTTDRKSEGRKHRCSLCDKWSALCSRFIRLLQHLVGFL
GENIAGHPVACMAICIFFVLFCAVGFLWLKTESRTEKLFIPQDSRAINDLNRAEKFFRLK
VRVAGVILVAHAENPNILAPECLAEAQNVHSQIITLKSFTEFCLTLSGQKARSLNDCVTI
DPFQIFQDRNFSNKSLIQIQAEINTAFNNTRLLMRDGQLFLRNFPQIFGDVTKQTSNRTI
TGARAMQLKYLIRDPPEDDINKKVLEWEKTFLDKVASMSASCFEIYYEAERSTDDAIKEN
SSADITLISITFTIMISFACFMLGKFVNPLTGHSILANVGVLAVAFGILAGMGLGTWSRV
TYVNMIGVVPFLVLSIGIDDMFIIVDELDRQPRDMGVIRTVKEVMSRTGATVTMTTMTDL
VAFAVSTSTAFPAIRYFCTYAALAVTLSYAMMITFFVAAMTFDIRRIKSGRRDCLPVCTV
PPTKDGQPHWDAPRPQTSNRLLKGWAKFLMLPATKFFVLVISVAILALGIYGTTKVTENF
DRRMLAKDDSALLKFLNVREKYYEQTIPVSLVLTGNIDYSDPDVQDEIRQLSKIVKDNCY
YRTQAVSWIEVFTNFSAASGMNITGPHFMPALKLFLESPECLSFKQDVKLSSNGSRVIAS
RVMAFLKNNPSSTFQKDAMLTIREDLAKKSPLDVIPITRPFIFFEQYAIIGRETTRNLII
AALAVLVVTSLFLVNFTVTLLVVVNFVALVLELFALMFIWDVSLNGVSMITLVMAIGFAV
DYSAHIAHAFVMSEEDTPNRRVIDAVSTLGASVFMGGFSTFLGMLVLVFATSEIYRIFFR
MFVGIVSFGLLHGLCILPVQLSLLCWKPVVTQRDPTHLLIRETNV
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatcgattgccaaccagccgttcttggaagaacaaaatggtgtcatacacact
gctaaaggaactacggaccgaaagagcgaaggaaggaaacatcgctgcagtctgtgcgat
aagtggtctgctttgtgcagtcggtttattcgcctgttacaacatctcgttgggtttctt
ggagaaaacattgctgggcaccctgtggcttgcatggcgatctgcattttcttcgtttta
ttctgtgctgtgggattcctgtggctgaaaacggaaagcagaactgaaaaactctttatt
cctcaagatagtagagccatcaacgacttaaacagagctgaaaagttttttcgactgaag
gttcgtgtagcgggtgtaattttggtagcccatgcagaaaatcctaacattcttgcgcca
gaatgcctggcggaggcccaaaacgtacacagtcaaattataacattgaagtcttttaca
gaattttgtttgactctctctggacagaaagctagatccttgaatgattgcgtgactatt
gatccgtttcaaatttttcaagacagaaattttagcaacaagtcgttgatacaaattcaa
gcagaaatcaatacagcattcaacaatacacgtttactaatgcgagacggacagcttttc
ttgcgaaactttccccagatattcggtgacgtgacaaaacagacaagcaatcgtacgatt
actggcgcacgtgcaatgcagctgaaatatctgatcagagacccacctgaggatgacatc
aacaagaaagtcctggaatgggaaaagacctttcttgacaaagtggcctctatgtctgcc
tcctgttttgagatttactacgaggcagagagaagcacagatgacgctattaaagaaaac
agtagtgctgatataactctgatatcgatcacctttactattatgatctcattcgcctgt
ttcatgcttggaaaatttgttaatccgctgaccggtcactcgatactcgcaaacgtagga
gttctcgcagtggcgttcggtattttggcgggaatgggtctgggcacctggtctcgtgtg
acgtacgtgaacatgataggcgtggtgccattcctagtgttaagtataggcatcgatgat
atgttcattatagtggatgagcttgatcgacagccacgtgatatgggcgtgatcaggact
gtcaaggaagtaatgtcgcgcacaggagccacagttactatgacaaccatgactgacttg
gttgcatttgccgtgagtacatcaactgcttttcccgccatcagatacttttgcacttac
gcagccttagccgttacgctctcctatgctatgatgataacctttttcgtcgccgcaatg
acgtttgacatcagaagaataaaatccggccgaagagactgcctgcctgtatgcacagta
ccacccacgaaagatggtcaaccccactgggacgcaccgcgccctcagacctcgaaccgt
ttactaaagggttgggcaaaatttcttatgttacctgcaacgaaattttttgtgcttgtc
atttctgtggcaatccttgccttgggaatttatggaacgaccaaggtgactgaaaatttc
gatagaagaatgctggcaaaagatgactctgcgcttttgaaatttctgaacgttcgagag
aaatattacgaacaaaccattcctgttagtttggtcctaacgggtaacattgattacagc
gatcctgatgtccaagacgagatcaggcagctgtcgaaaattgttaaggacaattgctat
taccgaactcaggctgtgtcttggattgaagtttttacgaatttctctgctgcgagtggg
atgaacattactggaccacattttatgcctgccctaaaactgttccttgaaagtcctgaa
tgtttatctttcaaacaagatgtgaaactgtcgtccaacggaagtcgcgtcattgcgtct
cgtgtcatggctttcttgaagaacaacccaagctctacctttcagaaggacgccatgttg
acaattcgtgaggatcttgccaagaaatctccactcgacgtgataccgatcacccgtcca
ttcatctttttcgaacagtatgccatcattggaagagagaccacaaggaacctcatcata
gcagccctggctgtgctggtggtaacatctttgttcctggtcaatttcaccgtaacactt
ctggtggtggtgaattttgtggctctggtcctcgagctgtttgcgttgatgttcatctgg
gacgtgtctttgaatggcgtctcgatgatcactcttgtcatggccattggttttgccgtg
gactacagtgcgcatattgcgcatgcgtttgtgatgtctgaggaagacacacctaacagg
agagtcattgacgctgttagcacgcttggtgccagtgtcttcatgggaggtttcagtacc
tttcttgggatgctggtgctagtctttgccacttcggagatctatcgtatttttttccgc
atgtttgtgggaattgtttcgttcggacttctccacggcttatgtatattacccgttcaa
ctgtccctgttatgttggaaaccagttgtgactcagagagacccaacgcatctgttaata
agggaaacaaatgtttga
DBGET
integrated database retrieval system
