Pocillopora damicornis (lace coral): 113681679
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Entry
113681679 CDS
T05773
Name
(RefSeq) ribosomal RNA small subunit methyltransferase NEP1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113681679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdam03009
]
113681679
Enzymes [BR:
pdam01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
113681679
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
90S particles
Other 90S particles
113681679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
AFOR_N
Motif
Other DBs
NCBI-GeneID:
113681679
NCBI-ProteinID:
XP_027054588
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MADEGSEFERPRKIPKTLKEKDSGKRLIVILEKASLETVKNGKSFELLNCDKHKTIMRKN
KKDPATARPDITHQSLLMLLDSPLNKAGLLQVYIHTERNVLIEINPHTRIPRTFDRFCGL
MVQLLHKLSIHASDGPQKLLKVIKNPVTDHLPTGCRKVGTSFHSDNLVKLKDVIPKDEPI
VFVVGAMAHGSIDVPYVEDTVAISQYPLSGALTCAKICTAFEEAWGVV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagggagcgagtttgaaaggccgcgcaaaattcctaaaacactgaaagaa
aaggactctggaaaacggcttattgtaatcctagaaaaagcttcacttgagacagttaaa
aatggaaaaagtttcgagttacttaattgtgacaaacataaaactataatgaggaaaaat
aagaaagatccggcaacagctagaccagacatcactcatcagagtttgttgatgttactg
gacagtccgctgaacaaagcaggtcttttacaagtctacattcatacagagagaaatgtc
cttattgagattaacccacataccagaataccaagaacgtttgaccgcttttgtgggctt
atggttcagttgttgcacaaacttagcattcatgcttctgatggtcctcaaaagttactc
aaggtcatcaagaaccctgtaacagatcatttgccaactggttgtaggaaagtgggaaca
tcttttcattctgataatcttgtgaagttaaaggatgttataccaaaagatgagcccatt
gtgtttgttgttggagccatggcacacggctcgattgatgttccttatgtggaagacact
gtggcaataagtcaatatccattgtcaggggctttaacttgtgcaaaaatctgtactgct
tttgaagaagcatggggagtagtgtga
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