Pocillopora damicornis (lace coral): 113681723 Help Entry 113681723         CDS       T05773                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19720   collagen type III alpha Organism pdam  Pocillopora damicornis (lace coral) Pathway pdam04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:pdam00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     113681723  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:pdam00536]     113681723 Glycosaminoglycan binding proteins [BR:pdam00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113681723 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Endostatin Collagen_trimer PLAT Motif Other DBs NCBI-GeneID:  113681723 NCBI-ProteinID:  XP_027054646 LinkDB All DBs Position Unknown AA seq 1236 aa AA seqDB search MGPKGSRGRPGRPGPAVFFDSEEIVITVKGQKGEPGPEYTFVKEINCDKDKCGQYIQGPK GEPGQNGNRGAPGTVGLPGPPGTPGKPGVILDPETGLPVDPPKGERGYPGMDGMDGQKGE PGPEGQRGVMGPPGQKGERGVTGLIGFPGMNGAPGPIGLPGMGMPGPRGSPGRDGAKGET GDKGRMGDRGIQGPKGMDGPMGDDGVPGPPGPKGSKGNSIMGPPGPPGPPGPKGDASMME VILRPEKGDQGAPGPPGPPGDSGAFEGIKREPGQAGEPGAKGERGVDGRNGTKGQKGDAG TSPGPQGAKGEKGESGDFCNCNFTKGDIGPMGPQGPPGLPGLPGNNGKNESGEPGDKGEP GPKGEKGKPGSLGFPGVRGKKGSQGEEGPQGPVGDTGERGQKGEQGSQGENGLKGEKGDQ GVGLKGEAGEPGETGPQGPPGPPGPTVPAITEKGSKGEQGNNGSQGERGPQGEKGEQGSI GFPGRKGATGRPGPIGFPGKKGEPGAQGPNGEGVPGAQGPAGQKGETGSKGDQGKRGTIG FPGLKGIKGAKGDEGRNGTDGQKGEPGESIQGPPGPPGPPGPPGVTTETNTGGESSAQIS AQKGDKGEIGRIGFPGKKGEKGTIGEQGIKGEKGEEGQDGKTGRLGFPGKKGDPGEKGER GFNGTTGPQGITGPPGSPGEVGRQGPIGFPGRRGNTGTPGPPGPPGPPGTPGHKGEPGEE VSIGSTEGVNGNGGKAKGEKGDQGEIGKPGSQGEKGTNGTNGIKGEKGEQGVGEKGQKGD NGIAGKKGEAGVGGEKGTKGEQGVQGKQGPEGPEGPQGPPGETGEPGDPGETGNTGQKGQ KGESGDDGIKGESGQAGNDGVNGTKGSKGQRGGLGFPGLKGATGSKGEAGIQGLQGLKGE PGNSTEGPIGPQGPSGIPGNPGPPGPPGISGPPGTPGKDSDVSGPPGPPGPPGPPGENAE IGFTNGQTDNSGVLVFDTQDRLIRIVEKVKQGTMAFVISDQMLYIRALRGWRAITLGPTI FAGPTEASQTTKLSTTKPPTNLILSPANVKLRGPYVRMVALDTPQTGQMHSVRGVDEMCW RQSRAANLTGAYRAFISNRLQHVYSIIHREDRDLPVGNLQGDQLFPSWRSLFKLQYAFNP DIPIYSFNGSNVLEDPAWPLKHIWHGSRKNGHKYRFNCRSWMSSRSKDSSTASALNGREL ALAEREFPCSSNLVVLCVHINPTLRRRYRSRHKKVL NT seq 3711 nt NT seq  +upstreamnt  +downstreamnt atgggaccaaagggttctcgaggtcgaccgggacgacctgggccagcagtattctttgat tctgaagaaattgtgatcactgtcaagggacaaaagggagaaccgggacctgagtataca tttgtaaaggaaataaactgcgataaggataaatgtggccagtacatccaaggtccaaaa ggggaacccgggcaaaacggtaaccggggtgccccgggaactgtggggttacctggtccg ccgggaaccccgggaaaacctggagtgatacttgatccagagacaggattgcctgttgat cctccgaagggtgaaagaggatacccaggaatggacgggatggacggacagaagggagag cccggaccggaaggacagcgaggagtaatgggtccccctggacaaaagggcgaaagaggg gttaccggattgataggttttcccggaatgaatggggcaccaggacccatcggactacca ggcatgggtatgccagggccacgaggtagcccgggacgagatggcgcgaaaggagaaaca ggcgataagggtcgaatgggcgatcgaggtattcagggtccaaaaggaatggatggtcca atgggagatgatggagttccaggacccccgggaccgaagggctctaaagggaacagcatt atgggcccaccaggtccgccaggaccaccggggcccaaaggggatgcatccatgatggag gtgattcttagacccgagaaaggagaccaaggagctccgggtccaccaggacccccaggg gattcaggtgcatttgagggcattaagcgagaacctggacaagctggggaacctggagcg aagggtgaaagaggagttgatggaaggaatggaactaaaggacagaaaggagatgctggt acctcccctgggcctcaaggtgccaaaggagaaaaaggcgagagtggagatttttgtaat tgtaactttaccaaaggggacatcggacccatgggtcctcagggaccccccggtcttcct gggttgccgggcaacaatggaaagaatgaaagcggggagccaggagacaagggggagcct gggccaaaaggagaaaagggtaaacctgggtctttaggctttcctggagtgagagggaaa aaaggatcacagggagaagaaggaccgcaagggcctgtgggggataccggagagaggggt cagaaaggagaacagggctctcaaggagaaaacggtttgaaaggagaaaagggagatcaa ggcgttggactcaaaggtgaagcaggggagcctggtgagactggtccgcagggcccacca ggacctcccggtccaaccgtcccagcaatcaccgaaaagggaagcaagggagaacaagga aataacggttctcaaggagaacgaggaccgcagggagaaaaaggcgagcaagggagtatt ggttttcccggtagaaagggtgccacaggacgaccaggcccgattggatttcctggtaag aaaggtgaaccaggcgctcaaggccccaatggtgagggagtgcctggagcccagggtccc gcgggacaaaagggtgagacaggatccaaaggagaccagggaaaacgcggaaccattgga tttccaggtttaaagggcataaaaggcgctaagggtgatgagggtaggaatggcactgat gggcagaagggggagcctggtgaaagcatccaaggaccacccgggcctccggggcctccg gggccccctggtgtaacaacggagacaaatactggaggagaatcctcagctcagatttct gcacaaaaaggcgacaagggtgaaattggaaggattggttttccgggcaagaaaggagaa aaggggaccatcggggagcaaggcatcaaaggagagaaaggggaagaaggacaggacgga aaaaccggaagattgggattcccagggaaaaagggagacccgggggaaaagggagagcgt ggatttaatggaacgacaggacctcagggcattacgggtccgcctggtagccctggggaa gtgggacgccaggggcccattggtttccctggacgtagaggcaacacgggtaccccaggc cctcccgggcccccgggacctccaggaacccctggacacaagggagaacctggtgaagag gtttccatcggatccacagagggagtgaatggcaatggaggcaaagccaaaggagaaaag ggggatcaaggcgagattggcaaaccaggttcccagggagagaaaggaacaaatggaacc aacgggataaaaggagaaaagggggaacaaggagttggtgagaagggtcaaaaaggtgat aatggcatcgcaggaaagaagggagaggcgggagtaggaggtgaaaaggggaccaaagga gaacaaggggtccagggaaaacaggggcctgaaggtcccgaaggtcctcaaggtccccca ggagagactggtgaaccaggtgatccaggggagactgggaatacaggacaaaaaggacag aagggggagagtggagacgatgggataaagggagaatctggacaagcagggaacgatgga gtcaacggaaccaaggggagtaagggtcaaagaggcggcctaggtttccccggactcaaa ggtgcaacaggaagcaagggagaggctggaatacaaggattgcaaggattaaagggagag ccagggaattcaactgaaggaccaataggaccgcaaggaccgtcgggaattcctggtaac ccaggccctccgggaccacccggaatatctggtcctcctgggaccccagggaaagatagc gatgtttctggtcctccggggccaccaggacctccaggaccccccggagaaaatgcagag attggctttactaatgggcagacagataattcaggggtgctggtatttgatacccaagac agacttatccgtattgtagagaaagtgaaacaaggcaccatggcttttgtcatctccgac cagatgttatatataagggccttacgcggctggagagcgatcacgcttggtccaaccatc ttcgcgggtccaacagaggcttcccaaacgacgaaactctccactaccaagcctcctacg aatctcattttgtctccagcaaacgtcaaactacgaggaccatatgtgcgcatggtcgcc ctcgatacaccgcagaccggtcagatgcacagcgtgaggggtgtggatgaaatgtgctgg cggcagtcccgtgctgccaatttaaccggagcataccgagcttttatttctaacaggctc caacatgtttattcaatcatccacagagaggacagagatctccctgttggcaaccttcag ggagatcagctgtttccttcttggagatccttattcaagttacaatatgcatttaatcct gatatcccaatatattcattcaatggatcaaacgttctagaagacccagcttggcccctc aagcacatctggcacggatcgcgaaaaaatggccacaagtaccgatttaattgtcgaagc tggatgagcagccgctccaaggactccagtacggcctcggccttgaatggccgagagcta gccttggccgagcgcgagtttccttgcagcagtaatctagtggtgttgtgtgtgcatata aaccccacactacgccgccgatacagatctcgccataaaaaggttttgtga

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