Pocillopora damicornis (lace coral): 113681915
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Entry
113681915 CDS
T05773
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113681915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113681915
03036 Chromosome and associated proteins [BR:
pdam03036
]
113681915
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113681915
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113681915
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
113681915
NCBI-ProteinID:
XP_027054850
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
MFGSTSSTPFGTGSTFGTGTTFGGQTSTAQFGAGGGTGLFGNNQKPLGFGSTFTQPQASG
TSTLFGGTNTGSIFGGTGTTTGNIFGQQQPTSQSSFGGFGTTGGGLFGSTAKTTAGTSVF
NTGGQTTFGSTATSGFGSSAGSSLFGSNATKGTGLFGSTQAGSSLFGQTSAANTANFGVL
GASGNTALGTPVKFNVVPGTDSMVKNGITTNISVRHQCITVMANYDKKSLEELRIEDYEA
GRKTGATGATGATGSTGFPGLATSSAAGSLFGNTASTGFGAAQKPATGFGTTGVFGAGNT
TTSGLFAQQQQTTGGLFAQQKTGGLFGAQTSSAGAPAFATGFGTGVFGQTSSGQTTQSGL
FGGTSTSTGTGLFATQSSGFGQTQTGTGGLFGQTGFGLGQQQSTAFGKPFGALGTGATGT
LFGAQNKPATGFNFGASAGGLGTSAFNTATSQAGGLFGAKPTTFGTGTAFGTNTGTGLFG
TTGTLGAGTGLNAGTLGTFGTLGAQQTSLFGGNALGGNQNTALTTLQQQQQQKVLEQQLL
ILSNSPFGDSPLFRNSLLEKSKPERASTATTSSLQKVVTTPSHYKVSPRPAARIKPKPIN
NHTMNKSKLFEGLEEDSGLSPDTFVPRKNIKKLVLKTKSSKEDSPLSVVDTTRVKLSTLE
GDDSLPATRSPLPPSPPPSQDMSPMRLSATPAGLQSGERSSDDRVSTSAGVSPMGVRFSR
VPDSVDTTISELNVRRLPRRDEEDGSVKGSVIGEDSSSDTTSRDNVGVVLKRLEYYTVPP
VQELNQQMDSNGDIFVNDFVVGREGYGKVKFYGRTNVAGLNLDEIVFFRRREIEVYPDTY
LNKPPVGEELNKKAEITLENVWPSDKTTREPIKSPERLNLLGWQKRVETATEKLGATFLD
FNLHTGYWVFTVDHFTRYRMDDEFFDDEQAQKKLKRPPLKSYSQDLEVSIEKEKEEIFRR
LQEKKQQLEVYEKKKQQAALSSLDQDSVMADIDQQTFPEEMLEDQIGDGSDGEEEVDSSP
ASHQLASALGMNAQRIQVMKASFFADPSQLAAPFAKDSPTVDKSLFSSSLSKAGHLKSSV
YPPSMPLGPLLSPKVQRSVDESRQMSQSLFGSPQIGVYPLRYPLVHDVTPVAPPSPIQLP
SAIGTAMDIGIKVVGARNQFGLVPKKDSLVNGKENLIADAGLMMGRSFRVGWGPGFVLVH
SGTPLGKQEGKPAPPTSVDFLSMKPRPSSSEGSAPFGVTIEKLNVALHDSRGPSGVVLEH
VRQQHETVLEAQLQHTVVSSEEHCPFFQPSSGVKALHHHAEVARRNKEATDPGPLRDGAE
QICLVWDLVVALWGKLTEDDDDDDDDSDIGAEEDRETYQNRVARKQALSNWLAEAAKTKI
SQEVDNANFQESDHLKSIFSYLTGKQISRACREAQLHGDYRLSLLLSQVTGNTFTRNLLY
KQLADWQEMKADVFINRERIKIYALLAGVMVWEISRDPASQVQSLMRQEVNVCEGLDWKR
VLAVHLWYFCSPTCSIADALQAYESSFKGSSSHGRYGASPHPPYVEEDEEDEDENKFITR
DTCYHLLKLYCKRSHRLERLLSPSTSTALQLDFRLSWHLYQVLLSLHYTHLSERHAAMLH
CEFAAQLEGLGLWHWAAFVLLHIEEPTRRENVVRSLLCRYCCVSEDHANSEKERFMLNKL
KIPAEWIHEAKALRARYEGKTREEAFHLVKARHWSLGHSVILRSLVSDAIINAEYDFLKT
LLKELEARDRSSTVKDWATGGQVFLDYLSLMEKFQDISKENFVPTKYDWEGIYAEVTSLC
SRINSLTSDIPKDMLCQYDMAKMCANFLKIVLKELTDLTDEGEALLPTHILVPHVTKLPM
PEDCTVEELRQLIPSYIQEIAAEN
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatctacaagtagtacaccttttggtaccggcagtacctttggaacagggaca
acttttggaggccagactagtacagcacagtttggtgcaggtggaggtactggtcttttt
ggaaacaaccaaaaaccactgggctttggaagtacatttactcagccccaggcctcaggg
acctcaacattgtttggaggcacaaatactggaagtatatttggaggaactggaactacc
actggaaatatctttgggcaacaacaacccactagtcaatcctcctttggtggttttgga
actactggaggtggtttgtttggtagtacagcaaaaactactgcagggacaagtgttttc
aacacaggtggccaaacaacttttggttccactgcaacatcaggatttggatcctcagca
ggctccagtttgtttgggtccaatgctacaaagggtactggattgtttggaagtacgcaa
gctggctcctcattatttgggcaaacttctgcagctaatacagcaaactttggagtgctg
ggtgcttctggcaacacagcacttggaacacctgtaaagttcaatgttgttccaggaact
gatagcatggttaaaaatggaattaccaccaatattagtgtcaggcatcaatgcatcact
gtcatggcaaattatgataagaagagtttagaggagctaagaattgaagattatgaagct
ggacgtaaaacaggagcaactggagcaactggagcaactggctcaactggttttccaggt
ctggccacaagttcagctgcaggaagtctgtttggaaatacagcttccacaggattcggt
gctgcacagaaaccagcaactgggtttggaactacaggcgtgtttggtgctggtaatacc
acaacctctggtctgtttgcccaacaacaacaaacaactggagggctctttgctcagcag
aaaacagggggactgtttggggctcaaacatcaagtgctggtgcccctgcatttgctaca
ggttttggtacaggtgtctttggacagacctccagtggacagacaactcagtctggtctc
tttggtggaacatccacatctactggcactggtttgtttgcaacacaaagttcaggtttt
ggccaaacacagactggaacagggggactttttggacaaacaggatttgggctgggtcag
cagcagtcaacagcatttggaaaaccatttggtgctttgggtactggtgcaactggaact
ttgtttggtgcacagaataaacctgcaacaggtttcaactttggagccagtgcaggagga
ctaggaaccagtgcatttaatactgcaacaagccaagctggaggactttttggtgccaaa
cctactacatttgggacaggaacagcatttggtactaatacaggcacaggattgtttgga
accacaggcaccctaggggcaggaacaggattgaacgcagggacactaggtacttttggc
accctaggcgctcaacaaacaagtttgtttggaggaaatgctttaggaggcaaccaaaat
acagcattgaccactttgcagcaacaacaacagcaaaaggttctggagcaacaacttttg
atcctgtcaaactcaccatttggtgactcaccattattccgaaattcactgttggagaaa
tccaaaccagaaagggcctccactgctactacatcctcattacaaaaggtggttaccaca
ccttcacactacaaggtttcccctcgaccagcggcaagaataaaacccaagccaataaac
aatcatactatgaacaagtccaaactgtttgagggcctggaggaggactctggtcttagt
cctgacacatttgtacccagaaagaacatcaaaaagcttgttttaaaaaccaagtcaagc
aaagaagattcacccctatctgtggttgacactaccagggtcaaactcagcactttggag
ggagacgacagtttgccagcaaccagatcacccttacctccctctccacccccgtcacaa
gatatgtcacctatgaggttgtctgcgacccctgctgggctgcagagtggagagaggtct
tctgacgacagggtgagtaccagcgctggtgtcagtccaatgggagtgcggttctctcgt
gtgccagattctgttgataccaccatctcagaattgaatgtacgccgcctaccaagaaga
gacgaagaagacggaagtgtcaaaggttctgtgattggtgaggacagttcgtcagacact
acatctagagacaatgttggtgttgtcttgaaaaggcttgagtattacaccgttcctcca
gtgcaagaacttaaccagcagatggacagtaacggagatatatttgtgaatgactttgtg
gttggccgcgaaggttatggaaaagtcaaattttacggcagaaccaatgtcgccggactc
aacctggatgaaattgtgttcttcaggcgccgtgaaatagaagtttatcctgacacgtac
ctcaataaacctcctgtgggcgaagaactgaacaagaaagcagaaatcactctggagaat
gtctggccaagtgacaagactactcgtgagccaataaaaagtcctgaaagactcaacctt
ctcggctggcaaaagcgagtggaaactgctaccgaaaaacttggagcaacttttcttgat
ttcaaccttcacactggatactgggtgttcacggtggatcatttcacgcggtatagaatg
gacgacgaatttttcgatgatgaacaagcccaaaagaaactgaagaggcctccattaaaa
tcatactcacaggatctcgaggtctctattgaaaaggaaaaagaggaaatctttagacgt
ctgcaagaaaagaaacaacagttagaagtttatgagaagaaaaaacagcaagctgctctc
tcttccctagaccaggatagtgtcatggcggacatcgatcaacaaacttttcctgaggaa
atgctcgaagatcaaattggagatggtagtgatggtgaagaagaggttgacagctcccct
gccagccatcagttggcatcagcacttggaatgaatgcacagaggatccaagtcatgaaa
gcatcattctttgccgatccgtctcaactcgcagcacccttcgctaaagatagtcccact
gtagacaagtctcttttcagttcatctttatcaaaagctggccatttgaagagttctgtg
tatccaccatccatgccattaggtcctttgctgtcccctaaagtacagcgctctgttgat
gagtcccgacaaatgtcccagtcactgtttggcagcccccagataggggtctatcctctt
cggtaccccttggtgcacgatgtaaccccagtagcccctccctcaccaattcagcttcca
agtgccatcggcacagcgatggacattggaattaaagtcgttggcgctcggaatcagttc
ggtcttgtccctaaaaaggactcccttgtcaacggtaaagagaaccttattgccgatgca
gggttgatgatgggccgctcctttcgtgttggctgggggcctggatttgtcttggtccat
agtggtactcccttggggaaacaagagggaaaaccagccccccccacctcggtagatttt
ttgtccatgaagcctagacccagcagcagtgaaggatcggcgccttttggagtgacaata
gagaaactgaacgtagctttacatgacagtcgtggcccaagtggtgttgtgttggagcat
gtaaggcaacagcatgaaactgtacttgaagcacagttacaacacactgtggtgtccagt
gaagagcactgtccgttctttcaaccttcctctggcgtcaaagccttgcaccatcacgca
gaagtcgcccgaaggaacaaggaagctacagacccagggcccctaagagatggagctgaa
cagatttgtttagtttgggacctggttgttgcgctttggggcaaacttacggaagacgac
gacgacgatgatgatgacagcgatattggggctgaagaagacagagaaacatatcagaac
cgtgtggctaggaaacaggctctgtcaaactggttagctgaggctgccaaaacgaaaatt
tcccaggaggtggataatgcgaatttccaggaaagtgatcatttgaaatccatcttcagc
tatttgaccggaaaacagatcagccgggcctgtcgtgaggcgcagcttcatggtgattat
cgactttcattgttgttgtcacaagtcacagggaacacattcaccagaaacttgctgtac
aaacaactggcggattggcaggaaatgaaggcggatgtatttatcaacagagaaagaatt
aaaatctacgctctgcttgctggtgtcatggtatgggagatatcacgtgacccagccagt
caagttcaaagtctgatgcgtcaagaggtcaacgtctgtgagggactggattggaagaga
gtactggcggtacacctgtggtacttctgttcaccaacgtgttcaatagctgatgcgttg
caagcgtacgagtcctcatttaagggaagttcgagtcacggcagatatggtgcttctcct
catccgccttatgtcgaagaagacgaagaagatgaggatgaaaacaagtttataacaaga
gatacctgttatcacttgttaaagctctactgcaaaagatcgcacagactagagagacta
ctatcaccatcaacatccactgctctgcaactagattttagattgagttggcatctgtac
caggttcttttatcgctccactacactcatctttccgagcgacacgcggccatgttacac
tgtgagtttgctgcccagctggagggactgggtctgtggcattgggcggcgtttgtcttg
ttgcacattgaggaaccaaccaggcgagagaatgtggttcggagccttctgtgtcgttac
tgttgtgtgtcagaggatcatgctaactcagagaaagaacgtttcatgttgaataaattg
aaaatccctgcggaatggatacacgaagctaaggccttgcgagcgcgctatgaaggaaaa
actcgtgaggaagctttccacctagtcaaggctcgccactggagtctggggcatagcgtt
attctgcgcagtctcgttagtgacgcaattattaacgcggaatacgactttttaaaaact
ttattgaaagaactggaagcacgagatcgcagctcgaccgtgaaggattgggcaacagga
gggcaggtgtttctggattatctttctttgatggagaagttccaagacatttcaaaggag
aactttgtgccaactaagtatgactgggaaggcatctatgctgaagtcacgtctctttgt
tcgaggatcaacagtttaacatcggacatacccaaagacatgttgtgtcaatacgacatg
gctaagatgtgcgctaatttcttgaagattgtcttgaaggaactgacggacctcaccgat
gaaggagaggcccttttgccaacacatatactagttcctcacgtaaccaaactcccgatg
cccgaggactgtaccgtagaggaattacgtcaactgattccgagctacatccaggagatc
gccgctgagaattga
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integrated database retrieval system
