Pocillopora damicornis (lace coral): 113681921
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Entry
113681921 CDS
T05773
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03030
DNA replication
pdam03410
Base excision repair
pdam03420
Nucleotide excision repair
pdam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113681921
03410 Base excision repair
113681921
03420 Nucleotide excision repair
113681921
03430 Mismatch repair
113681921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdam03032
]
113681921
03036 Chromosome and associated proteins [BR:
pdam03036
]
113681921
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113681921
DNA replication proteins [BR:
pdam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113681921
DNA Replication Termination Factors
ELG1-RFC complex
113681921
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113681921
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113681921
Check point factors
HRAD17(Rad24)-RFC complex
113681921
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
AAA
Rad17
nSTAND6
AAA_22
AAA_5
Rep_fac_C
Sigma54_activ_2
MTC2_N
ABC_tran
RCF1-5-like_lid
AAA_16
Prenyltransf
Motif
Other DBs
NCBI-GeneID:
113681921
NCBI-ProteinID:
XP_027054859
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MSLWVDKYRPTSLSKLDYHKDLAAHLKKLVHCGDFPHLLVYGPSGAGKKTRIMCILRELY
GPGVEKLRIEQQSFTTPSNRKIEMSTIGSAYHLEINPSDAGIYDRVVVQELIKTVAQSHQ
LDSTTQKEFKVVVLTEVDRLTKDAQHSLRRTMEKYTATCRLVLCCNSTSKVIPAIRSRCL
GVRVAAPSICQILHNVCKKEGLTIPAELSCFLISFFCSCIFRLLEIRGRFYELLTHCIPP
DVIFKGLIKELVTNCDGSLKAEVTEMAAHYEHRIHQGNKAIYHLEAFVAKFMSIYKRFLE
EGMADLF
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcttatgggtggataaatatcgtccgacttccttatccaagctagactaccataag
gatcttgcggcacatttgaaaaaactggtgcactgtggagactttccacatctattagtt
tatggcccatcaggggctgggaagaagactcgaatcatgtgcatcctgagagagctctat
ggtcctggtgtggagaaattgaggattgaacaacagagtttcacgaccccatcaaacagg
aagattgagatgtcaactattggcagtgcttaccacttagaaatcaatccaagtgatgct
gggatttatgatcgcgttgtagtccaagaacttatcaagactgttgcacagtcacatcag
ttagattcaacaacacaaaaggaatttaaagtggtagtcttaacagaagtagacagactc
actaaggatgcacagcattctctacgccgaaccatggaaaagtacacagcaacatgcaga
ctggttctttgttgtaactcaacaagcaaagtcattcctgcaattcgcagtcgttgtttg
ggagtcagggtggctgctccatcaatttgtcaaatacttcacaatgtttgcaaaaaggag
ggcctgactattccagcagagctttcttgttttttaatttcgtttttttgttcatgtata
ttcaggttgctagagataagaggtagattttatgaactcttgacccactgcattcctcct
gatgtaatatttaagggtctgatcaaagaattagtgaccaactgtgatggcagtttaaaa
gcagaagtaacagaaatggctgcccactatgaacaccgtattcatcagggaaataaggcc
atttaccacttagaggcttttgtggcaaagtttatgagtatttacaaacgcttcttagag
gaaggaatggcagatttgttttag
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