Pocillopora damicornis (lace coral): 113681978
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Entry
113681978 CDS
T05773
Name
(RefSeq) nephrocystin-3-like
KO
K19360
nephrocystin-3
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pdam03037
]
113681978
Cilium and associated proteins [BR:
pdam03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
113681978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_10
TPR_12
NPHP3
TPR_1
TPR_7
TPR_2
TPR_8
NPHP3_hel
TPR_MalT
TPR_16
NACHT
NPHP3_N
TPR_19
bZIP_1
AAA_22
AAA_16
APG6_N
Motif
Other DBs
NCBI-GeneID:
113681978
NCBI-ProteinID:
XP_027054930
LinkDB
All DBs
Position
Unknown
AA seq
1329 aa
AA seq
DB search
MGSGSSITKKVIVDDEFSEGDSMVTKNIPIECPPGRKTTSLKPSGSIGKKKSRRSTKAKP
VIKSFSLRSAFSVELEREADELRKELEIYRQNKATEIAELEVRKEKLHSDNQRLRGEIKA
LQATCLKLKNERAMALEGRDQALQRAAAFEKERDKVQRQFKIFRESREREIQDVLQAKRD
LELQFQQCLSVWSRDENRSEVVGNMATDWWASSLESDPSIDSLTHVTSFRGPEFFHSPLE
KEGPFTNISRDDWNAVVPSVLQLASLSLQAPVQQQTIKMYISAPSGMQQEVDLFKQLYIP
RLEWLCESHGKFLAVVHFEDTEEDLNEEDITAMVQMRRKQIKESKVFVAFLGGKSNSFTY
EEFHQAHLSNPGKCHPIFCFKDPDWDNDPSLKDESIFLAEQLKTEIRKTDDMKLFDNYKT
SEKGAELAYRELKKFLAKELGLFDDHSSPVDAHFLDGSSWDMAEDWEQVETLKAAAECSC
EMGLSNFYSDLNEHVSSAGLKAPMLVKGDAGFGKSLLLAKWIALQQSSLSGRLVLYHFVG
SSSSSSANSILMIRRFTLQLMKQLASSRAVPCDPGHLEEEFPRWLERAASKVHGGITIVI
DSADKLQGAPNHMKWLLDPLPVGARVILSVTESTCPVAWRPWSSLELQPLDFKGSVELLA
SSLNKHAVNIPQEQVGKRISIGRNRGIYFHFWGCFVSQQVSKMLYNSPSEDKFNPRFLTL
LAAEMAACEDRKALFDHFADCLSQKNTVDLLCHILSRIKKQFSHILFEWKLRRVFLHILL
ARNGISECELLKIIPIKWTEWLLLSQTLHHSCIVVTRMGLLTFSNKQVIRAVNETFSFED
NSQEMEESQESFIKFFEEKLSVNHICWRLTDELLWSLKKTCKKEELTECLLNPIVFKVFF
ERGRISELISYWEYLGIDQTSLGKKYVDVIKQVENESELTEETAEIFEVVGLFLKCLGLL
SQAAPLLQRALEIRETVLDPDHPLVAQSLHHLADLNALWGKFSPAEAFFKHAVEIKENAL
GRDHPSLVKDLEGLAILYKKQEKHAMADSLRRQAEGIKQKANSSVDLSDLKKKTLQVEKL
ARGSPSAELARSLNELGVLYFLQNNHEAASSFFQRSLEMREAVLGPDHPDVAQSLHNLAA
LYNDQKLYEKAEPLYSRAYQIRLKAFPSNHGSVASTIKHLAVLYRKQGKYSSAEPLYRQD
LEIREKTFGKSHPSVATALNNLAVVLCLQDRQSEALPLYERALHIYEDTLGGSHPRVAET
LVNLAKLSYDLGFPEKAAQLYKRANDIRQNEPQPGLSPRSSCSQLSNNYLRKHSQPHDSV
SRVISLSNS
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgggttctggaagttctattacgaaaaaagtgatcgtagacgacgaatttagtgaagga
gattccatggtgaccaagaatattcccatcgaatgtccgcctggacgaaaaactacatca
cttaaaccaagtggttcgattggcaagaaaaagagtcggagaagcacaaaggcaaaacca
gtaataaaaagctttagtctccgctctgctttttctgtggagctagaaagagaagctgat
gaactccgtaaagaacttgaaatttaccgacagaataaagcaacagaaattgccgaactt
gaagttcggaaggagaaattgcatagcgataaccagcgacttcgtggcgagattaaagct
ttacaagccacttgtttaaagttaaagaacgaaagggctatggcattggaaggaagggat
caagcgcttcagagagcagcagcatttgagaaagaaagggacaaagttcagcgacagttc
aagatcttcagggaatccagagaacgtgaaatacaagatgtactgcaagcaaagcgtgac
cttgagcttcagtttcagcagtgtctatcagtgtggtcacgagatgaaaacaggtcagaa
gttgtaggcaacatggccacagactggtgggcgtcatctctggagagtgacccaagcatt
gatagtttaacacatgtgacatcttttcggggacctgaattctttcacagtccattggag
aaagaaggaccttttaccaacatcagtagagatgactggaatgcagtagtgccctcagtt
ctgcagcttgcatcattaagtctccaagctccagtccagcagcaaacaatcaaaatgtac
atatctgcaccaagtggcatgcaacaggaagttgatcttttcaagcagttatatattccc
aggcttgagtggctttgtgaaagtcatggaaagttcctggcagttgtccattttgaagac
acagaggaagacttaaatgaagaggatataacggcaatggtccagatgagaagaaagcaa
ataaaggagagtaaggtgttcgttgcatttttgggtggaaaatcaaacagttttacgtat
gaagaatttcaccaagcgcacttgagtaaccctggcaaatgccatcctatcttctgtttc
aaagacccagactgggataatgatccatctcttaaagatgaaagtatttttctggcagag
cagttgaagacagaaatcagaaaaacagatgatatgaagctgtttgacaattacaagacg
tcagaaaaaggagcagaacttgcatacagggaacttaagaaattcttagcaaaggaactt
ggcttatttgatgaccattcatcacctgttgatgctcacttccttgatggttcttcttgg
gatatggcagaggactgggagcaagttgaaacattgaaagctgctgcagaatgctcctgt
gaaatggggctcagtaacttctatagcgacctcaatgaacatgtgtccagtgcaggactc
aaagctccaatgcttgtaaaaggtgatgctgggtttggaaagtcacttctcttggcaaag
tggatagctctgcaacaaagcagtttgtctggacggctggtgctttatcactttgttgga
tcatcttcatcatccagtgctaattcaattctgatgatacgaaggtttactctgcagttg
atgaagcagttggcatcatcacgtgcagtgccatgtgacccaggtcacttggaagaggag
tttccacggtggctggagagagctgcatccaaagtccatggtggtatcaccatagtaatt
gattcagctgataaactacaaggtgcacctaatcatatgaagtggttgttggatcctttg
cctgttggtgcaagagttattttatccgtcacagaaagcacttgtcctgtagcatggagg
ccatggtcatcactggaacttcagcctttggatttcaaaggcagtgttgaattgcttgct
tcttctttaaacaagcatgcagtgaatatacctcaagaacaggtaggaaaacgcattagt
attggtcgaaacaggggcatttatttccacttttggggatgttttgtcagtcaacaggtc
agtaaaatgctgtataattccccttctgaagacaagttcaatccaagatttctaactcta
ctggctgcagagatggctgcttgtgaagatagaaaagctctgtttgaccactttgcagat
tgtttatcccaaaagaacactgtggaccttttgtgtcatattttgagccgcattaagaaa
caattcagtcatattttgtttgaatggaagctgagaagggtatttcttcatatccttttg
gctcgtaatgggatcagtgagtgtgagttattgaagattataccaataaaatggacggag
tggttattactgagtcaaaccttgcatcatagctgtattgtcgtgacaagaatgggcctt
ttgaccttttcaaacaaacaggtaataagagctgtaaatgaaacgttttcatttgaagac
aactcgcaagagatggaggaatcgcaggaatcttttataaaattcttcgaggaaaagcta
agtgttaaccatatatgctggaggttgactgacgaattactctggagtttgaagaaaact
tgcaagaaagaagagctgacagaatgtcttctgaacccaattgtctttaaagtgtttttt
gaaaggggccgcatatctgagctgataagttactgggaatacttgggaattgatcagacg
tcgcttgggaagaaatacgtggatgtgataaaacaggtggaaaatgagagcgaactgacg
gaggaaactgctgaaatatttgaggtcgttggtctgtttctgaaatgcttggggcttctc
agtcaggctgctccattgctgcaacgagccttggaaatccgagagacggtgcttgaccca
gaccacccgcttgtggctcaatctttgcatcatcttgctgatttgaatgcgctgtgggga
aagttcagcccagctgaagcattcttcaaacatgctgtagaaatcaaggaaaatgctctt
ggcagagatcacccttctcttgttaaggatttagaaggtttggctattttgtacaagaaa
caggagaaacatgctatggcagattctcttcgtagacaggcagagggtattaagcagaag
gcaaactcatcagttgatttgagtgacttgaaaaagaagaccctgcaagtggaaaaactc
gctcgtgggtcaccaagcgcagaactggctcgatcgctcaatgaacttggagttttgtac
ttccttcaaaataatcatgaagcggcaagttcatttttccagcgttctcttgagatgcgc
gaggctgttcttggtcctgatcacccagatgtggcccaatctctgcataacttggcagcc
ttgtacaatgatcaaaagttgtatgaaaaggcggagcctctctattcaagagcttatcaa
attaggctaaaggcctttccttcaaatcatggaagtgtagcatctactatcaaacactta
gctgttctttaccgaaagcagggtaaatattcttcagcggagccgttatacagacaagac
ttggaaatccgagagaagacattcggtaaatcgcatccaagcgtcgccacagccttgaac
aacctcgctgtagtgttatgtcttcaggacagacagtcagaagcattaccactgtatgag
cgagctttacacatctatgaagacacactgggtggatcacacccacgagttgccgagaca
cttgtgaaccttgccaagctgtcttacgacctgggattcccagagaaagctgcccagctg
tataaacgagcaaacgacatcagacagaatgaaccacagcctggtctctctcctcgttct
tcctgcagtcagcttagtaacaactatttgcgtaaacactcccagccgcacgacagtgtg
tcaagggtgatatcattatcaaatagttga
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