Pocillopora damicornis (lace coral): 113682736
Help
Entry
113682736 CDS
T05773
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04137
Mitophagy - animal
pdam04140
Autophagy - animal
pdam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113682736
04137 Mitophagy - animal
113682736
04148 Efferocytosis
113682736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113682736
Transcription factors [BR:
pdam03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
113682736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
bHLH_HIF1A
PAS
PAS_4
HIF-1a_CTAD
PAS_9
bHLH_NPAS4
HLH
Motif
Other DBs
NCBI-GeneID:
113682736
NCBI-ProteinID:
XP_027055704
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MASKAVKNSENQKKRRSRDAARSRRGQQNDEFVELANQLPLPAGLSSQLDRLCIMRLVNS
YIKMKNLLQSLVSQDMKKIVSLNVADTTVYDKASLEALDGFVFVVTPDGQCIYVSDNITH
YMGLTQIEVTGNSFYKYIHPCDHEELSNQLGGQIPLEDMEIFDGLFCSDSVFMMSNHLKG
GSKKSMHENPHKSFFLRIKSTLTSRGKNVNLRASTYRVVHCTGCMKMSVKVSESGEEEKV
PLFMVAIGVPLMFTSTFEVPLDRATFTSRHSLDMKFLSCDDSVADLLGFTPTEIVGKSWY
HFQHACDLDTALACHKTLLTKGQSVSKYYRFLLRNGGWVWLQTKANIVYDSKTCQPQFVL
CTNYIIMRVDEKEYILSTEQVNPVPAPLGLDLVVKKECEKGRGTRRKHSIVLEERTKVLK
AAAHEQRPSADVKPKKESNLNTCCMKTPAKQAAKKSCQCLEGVDCDHINFQEFFPVAWDT
NDDLIEQQKEYEKLLQTHYGVTDDTPSPTHLENSTTENRVPYIPSPSNDQNIDKGKVANE
EEENFDERAPFIPLSIMDSELDCDDDLLVEIPFLDSPMIPSPSSWLLNADESIPSPGSAV
MLPPAKPLSYNRRPSLSNSCSPVLSRKEIPTAIKHNGYVTNETAHKGKALFPNISTWEAE
VNAPVQNINLLQGDDLLEALECVDFL
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaaggcagtcaaaaatagcgagaaccagaaaaagagaagatcacgtgatgca
gcacgatccaggagaggacagcagaacgatgagtttgtggagcttgccaatcagctgcca
ctgcccgcaggactttcatcgcagcttgacaggctgtgcatcatgcggctggttaatagt
tacattaaaatgaaaaaccttcttcaatctctggtgtcccaagacatgaagaagattgtg
tctctcaatgtagcagataccacagtatatgacaaggcatcactggaggcactagatggg
tttgtctttgttgtaacaccagatggccagtgcatttatgtgtcagataacatcacccat
tacatgggactcacacagattgaagtaactggtaacagtttctacaaatacatccacccc
tgtgatcatgaggaactttccaatcagcttggtggacagatccctcttgaagatatggaa
atcttcgatggcctgttctgttctgattctgtctttatgatgagcaatcacttgaagggt
ggatccaaaaaatccatgcacgagaaccctcacaagtcatttttcttgcgcataaaaagc
acattgacaagcagaggaaagaatgttaaccttcgagcctcaacttacagagttgtccac
tgcactggttgcatgaaaatgtctgtgaaagtctcagagtcaggagaagaggagaaggtt
ccattgtttatggtcgccattggagttccgcttatgttcacatccacttttgaagttcca
cttgacagagccacctttaccagtcgtcacagtcttgacatgaaattcttgtcatgtgat
gacagtgttgcagaccttcttggtttcacaccaacagagattgttggcaagtcctggtac
cacttccaacatgcttgtgacttggacacagcattagcatgccacaagactttgctgacc
aaaggccagtctgtgagtaagtactaccgcttcttacttcgcaatggaggatgggtgtgg
cttcagaccaaggccaacattgtttacgacagtaagacatgtcagccacagtttgtcctc
tgcacaaattacatcatcatgagagttgacgagaaggagtacatactgtccacagaacaa
gtcaaccctgtacctgcacctctaggtcttgatctagtggttaagaaagaatgtgaaaaa
ggaaggggcaccagaagaaaacattccattgtgctggaggaacgtacaaaggtgctgaag
gcagcagcgcatgaacagcgtccaagtgcagatgtcaaaccaaagaaggagagcaacctt
aatacctgctgtatgaagacacctgcaaaacaggcagcaaagaaatcctgtcagtgtctt
gagggtgttgactgtgaccacattaattttcaggagttcttcccagtggcatgggacact
aatgatgacctcattgagcaacaaaaggaatatgagaagctgctgcaaacacactatggt
gttactgatgacacacccagtcccacccacttggaaaacagcaccactgaaaatagagtc
ccctacattccttcaccaagtaatgaccaaaatattgataaaggaaaagtagccaatgag
gaggaggaaaattttgacgaacgtgctccatttattccactttcaatcatggactcagag
ttggattgcgatgatgatttattggtggaaattcctttcctcgattcacccatgatacca
tcaccctcatcgtggctgctaaatgcagatgaaagtatcccatctccaggaagtgctgtt
atgctacctccagccaagcctctatcttacaaccgtcgtccaagtctgtctaactcatgc
tcacctgttttgagcagaaaggagatccctaccgccatcaaacacaacgggtatgtgaca
aacgagacggcccacaaagggaaagcactgtttccaaacatcagtacatgggaagctgaa
gtgaatgcaccagttcagaacattaatcttttgcaaggtgacgacctgcttgaagctctt
gaatgtgttgacttcttgtga
DBGET
integrated database retrieval system
