Pocillopora damicornis (lace coral): 113682905
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Entry
113682905 CDS
T05773
Name
(RefSeq) nucleoporin NDC1-like
KO
K14315
nucleoporin NDC1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113682905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113682905
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113682905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
113682905
NCBI-ProteinID:
XP_027055885
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MVPSDSSEPPRSEVSKVKWFTEGEFWWRTFAAVTWVMIILPHALLLSSLAASVDLFHPFN
WISGGLSLVLSFPFWVSTCFYGAISIVVTLSNSKFNTVKNVTHQNQMSALLFPLHPARMF
HIFLFTLCGSLSAWCFQGIIGDEEDVLTILCETSEEYCLNERLVFGILFGAWLGFYTSLN
YFLRKKFHFVFPRVQQKVLFQIKLSVGPCVKESIIVCLKACGWYYLLYYFLGNIPRDATA
NILDIALDRNVTPLNSIAGLLNLSQFWHLVTTGSLILFVWTFGNKLLIIFHTQIYRFPVE
YSLSHQQDQSLCVVIKNKTIPLLKYLALFDLVHLSQFSLTRRKQIFSLSQPSGRPDNWTS
ISTECLSLIESLTHKLSAEVSLQTHRQQPVLDPKVLGPALVNGHANGHTGQSSPLLSSPY
QSPLSVTRRHQSLSSPGTVYLWSDKTENTQKIPSPKTKKDFGVINHFKGRVNEMVDSSVS
KINQIPHRIACRLKEIPVIGFLFDKIPETQTQALFADCQLQIWAVEALSRLVASSYTEDT
YGVVQKSLPKIFVSLLNLLQALDQHSKLSLALISRPEIQPRPPQPQGYQLRATLVSSIYR
ITKIFHEHLRNLPMAVEHEKKLESFLMFRE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggtgccatcagattcgtctgaacctccacgttcagaagtttctaaagtaaaatggttc
acagaaggggagttttggtggaggacttttgctgcagttacatgggtgatgattatcctt
ccacatgctctattgctgtcctcattagcagcatctgtagatctttttcatcccttcaac
tggatttcaggtggcttatcactggttttaagctttccattttgggtatctacttgtttt
tatggagctatcagtattgtggtgacgctgtcaaattccaaattcaatactgttaaaaat
gttactcatcagaatcaaatgtcagccttgttgtttccccttcacccagcaagaatgttt
cacatttttttgttcacattgtgtgggagcctttctgcctggtgtttccaaggaatcatt
ggtgatgaggaggatgttttaactatattatgtgaaacatcagaagaatattgtttaaat
gagcgtctagtttttggcattctttttggagcatggttgggtttttatacaagtctgaat
tacttcttgagaaagaaatttcattttgtatttcctcgagttcagcaaaaggtcttgttc
cagataaagttgtcagtaggaccatgtgtaaaagagagtatcattgtctgcttaaaggca
tgtggatggtactaccttttgtattactttttaggtaatattcccagagatgccactgcc
aacattctagatattgctttggacagaaatgtgacacctctcaactccatagcaggcctt
ctgaacctttcccagttttggcaccttgtgacaactgggtcattaattttgtttgtttgg
acctttggtaacaaacttcttattatcttccacacacagatatacagattcccagtggag
tattcactcagtcatcaacaggaccaaagtctttgtgtagtgatcaaaaataaaacaatc
ccattattaaagtatcttgctttgtttgacctggtacatttgtcccagtttagcctgaca
agaagaaagcagattttctctcttagtcaaccaagtggtcggccagacaactggacaagt
atatccacagagtgtctgtctttaattgaatctcttacacacaaactgtctgcagaggtt
tctttgcaaactcatcgtcaacagcctgtgttggaccctaaagtgcttggcccagctctc
gtcaacggacatgccaatggacatacaggacaaagctctcctttgttgtccagtccatat
caatcaccattaagtgtgacaaggaggcatcagtctctgtcatcaccaggaacagtttac
ctctggtctgacaaaactgaaaacacacaaaagataccctctcccaaaaccaagaaagat
tttggtgtcatcaaccattttaaaggcagagtgaatgaaatggtcgacagttctgtctca
aagatcaaccagattccccacaggattgcttgtagattgaaagagatacccgttattgga
tttctgtttgataagattccagagacacaaacacaagctctttttgcagattgccagctt
caaatttgggctgtggaagccctatcaagactagttgcttcatcatatacagaagataca
tatggtgttgtacaaaagagtcttccaaaaattttcgtctctctcttgaatttacttcag
gctttggaccaacactcaaagctatcattggctttaatctcaagaccagagattcagccc
agacctcctcagccacaagggtatcagttaagagcaacactcgtgtcttcgatctacaga
ataaccaaaattttccatgaacatttacggaacctaccaatggctgtagaacatgaaaag
aaacttgaatcgtttttgatgttcagagagtag
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