Pocillopora damicornis (lace coral): 113682934
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Entry
113682934 CDS
T05773
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113682934
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdam01009
]
113682934
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113682934
03029 Mitochondrial biogenesis [BR:
pdam03029
]
113682934
Protein phosphatases and associated proteins [BR:
pdam01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113682934
Membrane trafficking [BR:
pdam04131
]
Autophagy
Autophagosome formation proteins
ULK complex
113682934
Mitochondrial biogenesis [BR:
pdam03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
113682934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
Spore_Cse60
INO80F
Motif
Other DBs
NCBI-GeneID:
113682934
NCBI-ProteinID:
XP_027055923
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MLHVFYVDLGSTYTFEMELAMESVQVLMSTVAAETGIPEDKQVLLISNGEALDPRERVYS
YNSAGTDTNPIFLFSKSTIESSIPPSPSLTLGSGEANLKEQVEKSLNLPPAYETLVSRAQ
LASEFHSLSIQIAESCQNLVYEQKLQRKGWAAVVANLESIASEFKARSSSVNQIYSEFLD
SRTRYIELLDRFKEILPLLARIPVLPCLISRQFSQARQHNVVSLLDWISAQDNKNSLQDM
VKQCIEAVEQFDESHLTQITTEVNQVLESLDNTNMKEIKGLDERLAGLQHILQTVQTFRQ
SQADMSQGLQQNLTSVQNIGRDQSVLHDLCASHQKQLLMLTKNHSYLRDIRKKCAKAKDE
LSANLHTRLRWIMYVEKKICDCDGTIILYHENIRRIKRRLEIIEQVNEAPRMYILAVAEV
VRRRSFSSQFQKWASKLCKSSLEARTEETAQREEFELLFGQHFLQSLFSGLSDRPSRFAE
KPPRPFDEQLPVISENDLQELKDQIPELASYLESSSVNVSMGEEGAKNSFLQSEELENVS
SVAQFPAEFDRTSDSITDKKVTSSIVDMSSSESKATQMSVDASSEIQWTCSGNQNTPGQE
GRQGATENYCTQDTAETTEDFHDSNSSERKKSNSDTSSEKSSAADDSDLVFRSAHEDYVT
VIDADLEVNFNEKEISPDLQPVGEVQEDCSGLLEEASQTPTLASSGTQSTERSIDVSALD
SGSQELETATLSIPNDVVQRLQQLQDQLTSTQESWEEAILEKETFKQLNMKVKDCVKDEL
NFLRQGLNDAKGLLIEWQSKMKEDVLLAVGNLKEKGDLCGKHILQKTKEEFEVELVQMNA
KFEKEKKEFIEIKIRLELEKKEILDQLTQLQAEKERNESQHKEETEKWSEIVTEYKAKLE
EHEGAAQKVQENKSRYEEDQQIRFNAIMMKLKREKEHAVLQAQEKIRELKQLLEQQEKDM
KSLAMEKDRMTEEFGQARSAFCKREQELVAALQDKESSILNSEMLMKNKEAEFLEQIEQE
KASALALLQVERQVWEANRAQGLPGKHKETECGTDAVLEEDDQQKMKFLEEENKKLAETL
SEQTVDKFGQLKQVLEAKDQQIKLLQQQLNQIKPPGGASAVSSKMDKISLRDFQSGDMIL
LLFDERYENYVALSTGPTLFFLHPDSMAGLDLATSGPKKRLWMLAQMTDKEYCQAKKPNN
RFRVPVGTKFYRIQAKPCEL
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatgtattttatgtcgacctggggagtacgtacacttttgaaatggagctggca
atggaaagtgttcaagtgctgatgagtacagtggctgctgaaacagggatcccagaggat
aaacaagtcttgttaatatctaatggtgaagcattggatcccagagaaagagtctacagt
tataacagtgctggcactgataccaacccaatatttttgttcagcaaatccaccattgag
tcctctattccaccatctcccagtcttaccttaggttcaggggaagcaaatttgaaggag
caagtggaaaaatctttgaatttaccacccgcatatgaaactcttgtatccagagctcag
ctagcatctgaattccattcactttccatacaaattgcagagagctgtcaaaatctagtg
tatgagcaaaagctgcaacggaagggatgggcagcagttgttgcaaatttggagagtatt
gctagtgagttcaaagccagatcaagtagtgttaatcaaatctactcagagtttctggat
tcaaggacgagatatattgagttacttgacaggttcaaagagatcttgcctctactggct
agaatacctgtacttccatgcctcatttcaaggcagttttcccaagctagacaacataat
gtggttagtctgctggactggataagtgcacaggacaacaagaatagtcttcaggatatg
gtcaaacagtgtattgaggcagtggagcagtttgatgaatcacatctgactcaaattact
acagaagtaaatcaggttttagagtcgcttgataatacaaacatgaaagaaatcaaagga
ttggatgaaagactagctggacttcaacacattcttcagactgtgcaaaccttccgtcag
tcccaagcagacatgtcacagggtctgcaacagaatttgacaagtgttcaaaatattggc
cgtgaccagtcagttcttcatgatctatgtgccagtcaccaaaaacagcttttgatgttg
acaaagaaccactcctatttgagggatatcaggaaaaaatgtgccaaagccaaggatgag
ttgtccgctaatctccacaccagattaagatggattatgtatgttgagaagaaaatttgt
gattgtgatggaaccatcatcttgtaccatgaaaatataagaagaataaagcgaagattg
gagattattgaacaagtgaacgaggcaccacgcatgtacatcctagctgttgcagaagtt
gtgagacgaaggtcattttcttcacaatttcaaaagtgggcgagtaaattatgcaagagc
tcattagaagcaaggacagaggaaacagcgcagagagaggaatttgagttgctctttggc
cagcattttttacaaagtttgttcagtggcttgtctgacaggccatctagatttgcggaa
aagccacccagaccttttgatgaacagcttccagtcatatctgaaaatgacctacaagaa
ttgaaagatcagattccagagctagcttcttatctggagtctagttcagtaaatgtcagc
atgggagaggagggtgcaaaaaacagttttttacagtcagaagaacttgaaaatgttagc
agtgttgctcaatttcctgcagaatttgacagaactagtgatagtattacagataagaag
gtgacatcttcaattgtagacatgtcttcttctgaaagcaaagctacccaaatgagtgtg
gatgcttcctcagaaattcaatggacatgtagtggcaatcagaacactcctggacaggaa
gggaggcaaggtgcaacagaaaactattgtactcaggatactgcagagaccactgaggat
tttcatgatagtaactctagtgagaggaagaaaagtaacagtgatacttcttcagagaaa
agctcagcagctgatgatagtgacctagtttttcgttcagcacatgaggattatgtgact
gttattgatgcagatttagaagttaatttcaatgagaaggagatctcacctgatctacaa
cctgtgggtgaagttcaagaagactgcagcgggctgcttgaggaagctagtcaaacacca
actctggctagttctggaactcagagcactgaaagatctattgatgtttcagctttagat
tctggaagccaggagctggagacagctactctgtcaattccaaatgatgtggttcaaaga
ttgcaacagctacaagatcagttaacatcaacacaagaatcttgggaggaggctattttg
gaaaaagagacatttaaacaattgaacatgaaggtcaaggattgtgtgaaggatgagctc
aattttttgcgtcagggtctgaatgatgccaaaggactgttaatagagtggcaatcaaag
atgaaggaggatgttttacttgctgtcggcaatttaaaagaaaaaggggatttgtgtggc
aaacacattctgcaaaaaactaaagaggagtttgaagtagagttggtgcaaatgaatgca
aagtttgagaaagaaaaaaaagaattcatagaaatcaaaattagacttgagcttgaaaaa
aaagaaattctagatcaactaacacaactgcaagctgagaaggaaagaaatgaatctcaa
cataaagaagaaactgaaaagtggagtgaaattgtgacagagtacaaagccaaactggaa
gaacatgaaggtgcagcacagaaggttcaggaaaacaagtcacgctatgaggaagatcag
caaatacgatttaatgccataatgatgaaactgaagagggagaaagaacatgctgtttta
caggcacaagaaaaaattagagagttgaaacagttacttgaacaacaggagaaagatatg
aagtccttagcaatggaaaaagacaggatgacagaagagtttggacaagcacgcagtgcc
ttttgcaaaagagaacaggagcttgtggcagctcttcaagacaaagaatccagtattctg
aattcagagatgctaatgaaaaacaaagaggctgaattcttagagcagattgaacaggag
aaagcatcagcactggcattgctgcaagtcgaacgacaagtttgggaagcaaatagagca
caagggttaccagggaaacataaagaaactgagtgtggtactgatgctgtgcttgaggag
gatgatcaacagaagatgaaattcctggaagaggaaaacaaaaagctggctgaaacattg
tcagagcaaactgtggacaagtttggtcagctgaaacaagttctggaggcaaaagatcaa
cagattaaacttcttcagcaacagctaaatcagataaaaccaccaggtggagcaagtgca
gtgtcatcaaagatggataaaatctctctgagagactttcaaagtggtgatatgattctt
ctcttatttgatgaacgatatgagaactatgtagctttgagtacaggaccaacgttgttc
tttttacacccagactcaatggcaggattagatcttgcaacaagtggccctaaaaaacga
ctatggatgcttgcacagatgactgataaagaatactgtcaagctaaaaagccaaacaac
aggtttcgagttcctgtaggaacaaagttctacagaattcaagccaaaccttgtgaattg
tga
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integrated database retrieval system
