Pocillopora damicornis (lace coral): 113683048
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Entry
113683048 CDS
T05773
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113683048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113683048
Membrane trafficking [BR:
pdam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113683048
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
ARM_TT21_4th
DUF6559
Motif
Other DBs
NCBI-GeneID:
113683048
NCBI-ProteinID:
XP_027056043
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MAEFYGSSANYESQAKMSFRAFEIAPVIERIVTTSADRPKTVECLDCAAQNLYIGTSDCF
VLNYVIDEGVSPLGKTTFQSRLQACKHLGMKKPIQQVLTAPAINRLLVLCDGSILMFTMF
GMEFLATGFKDRFKGVTAICRNDNPNMFDPFAVEVCMSLSKKKAIHILSVTEDRITLLKE
IPLPEPPLHMAVDGGSVCVALANQHRYCLVNILSGKVQELFHYEAEVTKGLVMGVGMDEF
LLNGPTDVMGMFVTSEGTSQRAPLSWSERLLALGYSFPYAVALGANSISVHSIIGQDQKS
QKQSLMFKGGRLLLNYDNQVFVCSSREVYCLVQLSFRKQVQMLLNEKRVSEALQLAHVAM
ETATGPQRDEKILQRTQQQAGFIYMAEGYFTEAGSLMKEGGLDPRELIILFPDLLSSNWK
YLPSREITELSALVKGSKQFLAEAKLFLMQFLEETRESAEDSGYKEEVDTALVKLYTQIN
SPDLLRLVSNRNACTVADTISCLQKHERYHALALFYDYHKQPVEAIAVWKRLIQEEIRDR
NFPGIDYVAKYLSRLQDSELLWNNVPWLLAKNQEIAVKVFTDRPTDYQPNDEKMKPDLIV
EYLQRFPVALQYYLEYLVYDRKFEKEKYHTHLALLYLEEVLKMRRDPSCSLDNLDKQRVK
LRAMLEWSSLYRVALLLSKINDDSDLDAEAAILYGKMEQYNKALKILVYKLEDFSEAERF
CELHSKGKDRNFRMKLFQTLLEVYLSSDEDHEPLIAPAVALLNSHMCDFDTAEAMKLIPD
EWSIGVISQFLCGSVRSSLHKSRTSKIFSSLARGENLKMRSSHMISHKAKFSVTEEKLCQ
ACRRPFNDPAVARYPNGVTTHIHCARNKTVCPVTGHVFSSKEQHRDEVNKDDRV
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcggaattctatggtagtagtgccaactatgaatctcaggcaaaaatgagtttcaga
gcgtttgaaatagcaccagtgatcgagcgaatagtgactacttctgcagatagaccaaaa
acggtggagtgccttgattgtgcagcccagaatttatacattggtacatcagattgtttt
gtcctgaactatgtgattgatgaaggtgtttcaccattgggaaagacaacatttcagtca
agacttcaagcttgtaaacatcttggaatgaaaaagccaatacaacaagttttgacagct
ccggcaataaacagacttctagttctgtgtgatggtagtattttgatgtttactatgttt
ggcatggagtttctggccactggatttaaggacagatttaaaggggtgacagctatttgt
agaaatgataatccaaatatgtttgacccatttgctgttgaggtgtgtatgtcactctcc
aaaaagaaagccatccatattctctctgttactgaagacaggataactctattgaaagaa
ataccacttccagaacctccacttcacatggcagttgatggaggatctgtttgtgtggca
ttggctaatcaacatcgttactgcttggttaatattctctctggcaaggttcaagagtta
tttcattacgaggctgaagttactaaaggacttgtcatgggtgttggaatggacgagttt
ttacttaatgggcccacagatgtcatgggcatgtttgttacttcagaagggacctctcag
agggcaccactcagctggtcagagagattgctggctctgggatattcgtttccttatgct
gtagcacttggagccaactccatttctgttcacagcatcatagggcaagaccagaaatca
cagaagcagtcacttatgttcaagggtggaagactccttctgaattacgataatcaagtg
tttgtttgttcttcaagagaagtctactgcttggtgcagctttcgttcagaaaacaggtg
cagatgttgttaaacgagaaaagagtaagtgaggctcttcagctcgctcatgtcgccatg
gaaacagcaacagggccgcaaagagatgaaaagatccttcaaagaacgcaacagcaagct
ggatttatatacatggcagaagggtactttacagaagcaggaagcctcatgaaagaagga
ggactggatccgagagagctgataatcttatttccagacctcctctcttctaactggaaa
tatctaccatccagagaaataacagagctgagtgctcttgtgaaaggtagtaagcagttt
ttggcggaggccaagctattcttgatgcagttccttgaagaaaccagagaatctgctgaa
gattcgggctacaaagaggaggtcgacacggctctggtgaagttgtacacacaaataaat
tctccagacttactaaggttggtgtctaatagaaacgcctgcactgtggcagataccatc
agttgccttcaaaaacacgagaggtaccacgctttggcactgttctatgactatcacaaa
caacctgtggaagcgatagctgtttggaaaagacttatacaggaggagattagagataga
aacttcccggggatagactacgtcgcaaagtatctttctaggttgcaggattctgagctt
ctctggaacaacgttccttggctgctggcgaagaatcaagaaatagccgttaaggttttc
acagacagaccaacagattatcaacccaacgacgaaaaaatgaaaccagacttgattgta
gaatacctacagagatttcctgttgctttacaatactatcttgagtatcttgtgtacgac
aggaaattcgagaaagagaagtatcacactcatctagcccttctttatttggaggaagtg
ttgaaaatgagaagagatccatcttgctctctggacaatcttgataaacaaagagtgaaa
ctgcgggcaatgttggagtggtcttcgctgtatcgagtggctctgttactatccaagatc
aacgatgattctgacttagatgctgaagccgccattctttatggaaagatggagcagtac
aataaagcactgaagattttagtttacaaacttgaggatttctctgaggctgaaaggttc
tgtgagctacattcaaagggcaaagacagaaactttcgcatgaagcttttccaaactttg
ttagaagtctacctatcttctgatgaggaccacgaaccattaatagcaccagcggttgca
cttctaaactcacatatgtgtgactttgacacagctgaggcaatgaagctgattcctgac
gaatggtcgatcggtgtaatttctcagttcctgtgtggttcagttcgatcaagtctccac
aaaagtcgcaccagtaagatttttagcagcctagctcgcggagaaaacctcaagatgcga
agttcgcacatgatctcccataaagctaaattttcagtgacggaggaaaaactatgtcaa
gcatgtcggcggccgtttaatgacccagctgtagcgcgttacccgaatggcgtgactacg
catatacactgcgcaagaaataaaactgtttgccccgtgacggggcatgtgttctcatcc
aaagaacagcatcgggacgaggtcaataaagacgacagagtttga
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