Pocillopora damicornis (lace coral): 113683466
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Entry
113683466 CDS
T05773
Name
(RefSeq) DENN domain-containing protein 4B-like
KO
K20163
DENN domain-containing protein 4
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113683466
Membrane trafficking [BR:
pdam04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
113683466
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
MucB_RseB_C
Motif
Other DBs
NCBI-GeneID:
113683466
NCBI-ProteinID:
XP_027056506
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MVDCEKPLRVGDYFVVAGLGNGKSTQNAIHLDDERNILEPITDITVIFKSLGEKPPIGYK
CIDKTPAGFPADLNHGSIRQPSCYLCIRRGTDKPPLTDIGVLYEGKDRLMAGCDIVTYTE
TGKSANVNNSGGNRTFITYRRAPHRMAHSSLAVTEICVIITSKNEKPPHAFCLIDRNLNK
GMVGSDVYLCYRKSLARLRSIMYPAEVLSRFPVEDYERFPLPDTIPMFCLPQGAIIECWP
ENSQYPLPSFSTFVLTGASGQKIYGAAVTFFELLPEEQLTEERKKALKLDDDQNSEEGKR
VAHTNKCMCVLSHWPFFEAFKKFLSQLYRISVSAQPLPIERYIAILMLDVPFPSPQRPRI
LVQTSMYDPFEISQLSHTPLPVSGASYIAMLRYLHPDNAMLLFYLVLTEHKILIHSLRPP
LMTSIAEAITTLLFPFSWQCPYVPLCPLGLNDVLDAPCPFIVGIDSRYFDQYDPPDDVTC
VDLDNNTISLENELKGASWKSLPKKPGKVLQERLSELFYQLYQLCHKERESIGGDIIETA
IELAPLDHDTSYSRKRLQLEVAIQDAFLRFMATILKGYEAFLKPITSRPTQGTCDLTSLF
DLEGFLRSRPNSQSKFFQILSRTQMFSRFIEGRSFVSSQDSLFAFFDNCLEKLDVLPDCR
LVEVDESVARGGQRTYVVTPPDVSNMDKGKLYTYPVFPVLNVDLMKPEGLSFSAKPAQTP
PVSPVVKRTKAERHQSVLMAKKYAGSPISWAKCLLAHCYSLWFIHLPAYVKRHHNKAKVL
HVAFEVLCKMKKKGVKLPDEVCYRVLMQLCGQYGHPALAVKVLFEMKNQGITPNAVTYGY
YNRAVIEGKWPSNTTSSHMWNKLRNFFAAVYELQRLARLAKNNKGDSLSPTGSNNDLDLL
DTPRRATLKKSDRSRTPSREREKALSHERLLDLGESNDGEGRRTPDREIKSRRERTISEM
STASEAADILNLSTTSLDGVPSSTRRKRHTNGRTVSETSVLSAAFSDGLQNSTLYINANS
EDSDPYEYTTRMLDDVILGLPAALQPDTALEAVLCSCNQCTKCGRYLYDEDILAGWTADE
SNLNTGCPYCHTQQVARLTVKIKDYRNCFSSHPSSELSSSINSFGSSELLPGNGEVEPTS
EPLSNSVPSTIESNLIKFSAPTRPISVVALSPPASNPVPIRGSHHRMRHSISAPSSANAS
PSGSLHGSPRTGSWFQRMRSSNSTCSHGSTWYVSRPPEERDNIMVTYLNPLVLRKELENM
FENDGISTLQFPDVVQAKPDIFWNLVWYFKRLDLPSHLADHVLSTYPSNERADRFEERRS
ISGLGTQVLVSTSWDGDREEYDTVPLYVLWNAPADQQGSLTDKGLTTRAVLQSVVAHIQE
NDVYSPALILLEERNRQKNINPNAKWSVYRELLYLSLTALGAENIDVDAFDKEYRRAYRS
LFESKNFSDLLCLEDKSPLTRAVYCRRTFDTPTLQPRVPKHLVNSFP
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggttgactgtgaaaaacctctgagagtaggagactactttgtagtagctggccttggt
aatggcaagtcaactcagaatgctatacacttagatgatgaaaggaatattctggaacca
atcacagacattactgtgatattcaagagtttgggagaaaaacctccaattggatacaaa
tgcatcgacaaaacccccgcaggatttcctgctgatcttaatcatggctccataagacag
ccatcatgttacctctgcattcgcagaggaacagacaaacctccattgactgatattgga
gtcctttatgaaggaaaagaccgcttaatggcaggatgtgacattgtgacatataccgaa
acaggaaagtcagctaatgttaacaacagtggtggaaatagaacattcatcacttatcgt
cgagcaccccacagaatggctcactcctcactggcagtcacagagatttgtgttattata
acaagcaagaatgaaaaaccaccacatgcattttgcttgatcgacaggaatctcaacaaa
ggcatggttggatcagatgtgtacctttgttacagaaagtcattagcaaggctgcgctct
atcatgtaccctgcagaggttctcagtcgatttcctgtggaggactatgaacgttttcca
cttccagatacaattccaatgttttgccttcctcaaggagcaattattgaatgctggcct
gaaaattctcaatatcctcttccctctttctccacatttgtacttacaggtgcttcagga
caaaagatttatggagcagcagtaacattctttgaactgcttcctgaggagcaactgaca
gaggaaaggaaaaaagctttaaagctggatgatgaccaaaattctgaagaagggaaaaga
gttgctcacacaaacaagtgcatgtgtgtgttgtcgcattggccattttttgaagctttc
aaaaagttcctgtcccagctgtatagaatttctgtatcagcacagccactgcccattgaa
aggtatatagcaattttgatgcttgatgttccttttccttcaccccaaagaccaagaatt
cttgtgcagacaagcatgtatgatccatttgaaataagccaactctctcacactcctttg
ccagtcagtggtgcatcttacatagctatgcttcgctacctgcatccagacaatgctatg
cttttgttttatcttgttctcactgaacacaaaatactgattcactctctacgaccacct
ctgatgacaagtattgctgaggcaataacaacgcttctgtttcccttcagctggcaatgc
ccctatgttccactttgtccattagggttaaatgatgttctagatgcaccttgtccattt
attgtgggtattgattcacgatactttgatcagtatgatccacctgatgatgtcacttgt
gttgacctagataacaacactatttcactagagaatgaactcaaaggtgctagctggaaa
agtcttccaaagaaaccgggaaaagtcttacaagaaagactgagtgagcttttttatcaa
ttataccaactgtgccataaggaaagagaatctattggtggagatatcatagagacagcc
atcgagttagctcccctggatcatgacacgtcctattcaagaaaaaggcttcaactagag
gtagccattcaagatgctttcctacggtttatggcaacaattttgaaaggctatgaggct
ttcttaaaaccaatcacttcaagaccaacccaggggacgtgcgatctgacgtcgctcttt
gaccttgaaggttttcttaggagtcgtccgaattcacaatcaaagttttttcaaatctta
tcaaggacacagatgtttagccggtttattgaagggagatcctttgtatcgtcacaagac
tctttgttcgcattctttgacaactgtttagaaaagctggacgtattaccagactgtcgt
cttgttgaagtagatgaatcagttgcaaggggtggtcagaggacctatgttgtcacacca
ccagatgtttccaacatggataaagggaagttgtatacttacccagtgtttccagtttta
aatgtcgatctcatgaagcctgaggggctttctttttctgctaagcctgctcagacgcct
ccagtatctcctgtggtcaaaagaacaaaggcagaaagacatcaatctgttctgatggcg
aaaaagtacgcgggaagtcccataagctgggccaagtgccttttagctcattgctacagt
ctgtggtttattcatcttcccgcctatgtgaagcgtcatcacaacaaggctaaagtgtta
cacgtagctttcgaggtcttgtgtaaaatgaagaaaaagggtgttaagttaccagatgag
gtttgctaccgagtgcttatgcagctatgtgggcagtacggccacccagccttagctgtg
aaggtcttgtttgagatgaaaaaccaaggaataactccaaatgctgtcacgtacggctac
tataacagggctgtaatcgagggcaaatggccttccaacacgaccagttcacacatgtgg
aataaactaaggaatttctttgccgctgtatatgagcttcaaagactagcgagattagca
aagaataacaaaggagattccttgtccccgaccgggtcaaacaacgacttagatctacta
gacacgcctagaagagcgacactgaaaaaatccgaccggtcacgcactccgtcacgcgaa
cgcgagaaagccctgtcacacgaacgcttgcttgacttgggagagtcgaatgatggtgaa
ggtagacgcactccagatagagagatcaaatcgcggcgcgagcgaacaatcagcgaaatg
tctacggcctctgaagcagcggacattctgaacctgtccaccacgtcgctggacggtgtg
ccgtcctccacacgaagaaaacggcacacgaacggtagaactgtcagcgaaacgtcggtg
ttatcagctgcgtttagcgatggtttgcagaattccacgttgtatatcaatgccaacagt
gaggactctgatccgtatgagtacaccaccaggatgttggatgatgtcattcttggcctt
cctgctgctctacagcctgacactgcactggaagctgtgttgtgttcgtgtaaccagtgt
actaaatgtgggagatacctttacgatgaagacatcttggctggctggacagcagatgag
tccaaccttaacaccggatgcccctactgccatacacagcaggtcgcaagactgacagta
aagatcaaggattaccggaattgtttttcatcgcatccaagttcagagttatcgtcaagt
attaacagcttcggaagttccgaacttctgccggggaatggcgaagtggaaccgacctcc
gaaccgctaagcaactcggtgccttccacgattgaatctaatcttatcaagttctccgct
cccacgcgaccaataagtgtcgttgcgctgtctccccccgcctctaatcccgtccccata
cggggtagtcaccatcgaatgcgtcacagcatcagtgcaccgtcaagcgccaacgccagt
ccctcggggagcttgcatggcagcccgaggactggatcatggtttcagcgcatgcgtagt
agcaacagcacctgtagccacggaagcacgtggtacgtatccagacctccagaagaaagg
gataatattatggtaacttaccttaatcctttggttttgagaaaagaacttgaaaatatg
tttgaaaatgatggcatcagcacactacaatttcctgacgtcgtgcaagcgaaacctgac
atcttttggaatctggtttggtattttaaaaggcttgacctgccctctcacttggcagat
cacgtgttgtccacctaccccagcaacgaaagagctgacagattcgaggagcggcgcagt
atctcaggacttggaacccaggtccttgtgtccacttcgtgggatggagacagggaggaa
tatgacacggtcccattgtacgttttgtggaatgcgccagcggatcagcaaggatcactg
acggacaaaggacttactactagggctgtattgcagtcagtagtggctcatattcaggaa
aacgacgtttacagcccagctttaatactgctggaggaacgaaaccggcaaaagaacatc
aaccctaacgcaaaatggagtgtttatcgagagttgctttacttgtcactgacagcctta
ggagcagagaacattgacgtcgatgccttcgacaaagagtacagacgagcctatagaagc
ctttttgagtcaaagaacttctcagatcttttgtgtttggaggataaaagcccgctgact
cgtgcagtgtattgcaggcgcactttcgatacaccgacactacaacccagggttccgaag
cacctcgtcaacagcttcccttga
DBGET
integrated database retrieval system
