Pocillopora damicornis (lace coral): 113683736
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Entry
113683736 CDS
T05773
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113683736
09123 Folding, sorting and degradation
03018 RNA degradation
113683736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113683736
03041 Spliceosome [BR:
pdam03041
]
113683736
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113683736
mRNA degradation factors
5'-3' decay
Lsm complex
113683736
Spliceosome [BR:
pdam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113683736
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113683736
NCBI-ProteinID:
XP_027056808
LinkDB
All DBs
Position
Unknown
AA seq
146 aa
AA seq
DB search
MVLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWKIPEC
YVRGSNIKYLRIPDEVIDMVKDEMVKQGKSRGTGRPGRGGRGGGGGRGGHREGGSGGGGR
GGSFGGRGGGRGAGGQKRNRDDSSGK
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggtgctacctctgtctcttctacggacggcacaaaaccaccctatgctggtggaactg
aaaaatggagagacgtacaatggccatcttgtaagctgtgataactggatgaacataaat
cttagagaggtcatttgcacttccagagatggtgacaggttttggaagatacctgagtgt
tatgtgagaggcagcaacataaaatatcttaggattccagatgaggttattgacatggtg
aaagatgaaatggtgaaacaagggaaaagcagaggtacaggaagaccaggacgaggtggt
cgtggtgggggtggaggccgtggaggtcacagagaaggtggcagtggaggaggaggaaga
gggggatcatttggtgggcgtggtggaggaagaggggcagggggccaaaagagaaataga
gatgatagctctggaaagtag
DBGET
integrated database retrieval system
