Pocillopora damicornis (lace coral): 113683952
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Entry
113683952 CDS
T05773
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdam03009
]
113683952
Ribosome biogenesis [BR:
pdam03009
]
Eukaryotic type
90S particles
Other 90S particles
113683952
Pre-60S particles
Other pre-60S particles
113683952
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
Proteasom_PSMB
Motif
Other DBs
NCBI-GeneID:
113683952
NCBI-ProteinID:
XP_027057041
LinkDB
All DBs
Position
Unknown
AA seq
1275 aa
AA seq
DB search
MVRLRKGKHKTWRKGQSCESNPATRKYRTAAKRGSITGRSTQNSNLTVEALAKHEERHDD
DGDVELKEDEGFSVKSGQTFGAFSISGLTDCSNPVFATVKRFWDSPSSQHKEVCAVLAAV
TEVIKSKGGKESETEYFAALMTALESADEMEARVAITFLLSLVIKSVPDAILQSKFSKSC
QVLVKIMASHAADGTPGLLRPLLACLCRLLSVQEGAVWSESSTITTYNGVLSFMVHNKPK
VRKAAQEAVKVLLEKPPGDMTHHPACGATAKFCVQQIEENGGSSQGTATTLHIIGILKEI
LPCLPVQNVKTICECLLKLMTLGNVMVTVNSLQAIYKLLCANPDTTTLSKQLNAQLINAL
YDYQPSVNDSNPSQAWISTMEKAYVNLARLDATLCYNHLPRFFSSLMSYFLSDQRVLSKA
AQDTMSILLQECLAPVAKEVCAEITKSSGASATPLHKIIKCIESGLQYRYQGSWSVILEV
VRVSFEVLGNQCPKLLRKLLVSLCDLRGTHQFPYVNKLDRAVGMAIQKMGPRVVLEAVPL
QLDKEIGGPCNFPRSWLLPVLKDNIKDTELKYFFEVLLPLSADLRAKATTLKEAGKLLES
KVYDTLQLQIWALLPGFCTRPTDICLSFKSVARILGTALTERADLRSTVCQALRLLISKV
SDDASKKELSQYSKNYLPILFNLYTAEDNEGDADKLAILETIRVYLSITDHKLVATFFSK
GLEKLTDGKSNGKSRHLMMDLVIAMVPYVDGQNIKKLYDLASPWLQATDITQQKKAYRVL
EQICGAESESSQEFVVSHLSELQEILLKTLAASSSASKTPRLRCLAHIIKKVEDPAEFIQ
AIIPEVILCSREVSVKARTSALTLLIECCNANFRSSGKTRQECLISFLELVVAGIAGSPH
MISATIISLSKVVYEFRHDVPSALLEKLIQGILVCLRSTAREVIKSCLGFFKVIISVMNQ
QDLLPYLQELIGGLVAWNDDARRRFRFNIKVLFERLLRKFGYQTIYKCTPEEHQKLVHNT
YKTTQRLKRQKMAARRDRKSHEDKEGFDQESPQLESYEDLMFGEDEEEERPGMKKKKQAA
KKGQAGERVKGPKAWIREGTEEEPVDFLDPGVVQRVVATDPKKPTKRKATDDFQVSSDGK
LIIQDNEDEEEQHEPGSKRKRKSGPEDPVEDMEEDPFPGKKKRKSFGGSNEDDALVEEVP
SRREKSDKAFGAEYKAKKAGGDVKKKGKPDPFAYVPLQLNMLNKRKQKKMTGQFKGLVRA
TKRGAANVKQKKGKR
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtttacgaaaaggaaaacacaaaacgtggcgaaaaggccaaagctgcgagtca
aatccggcaacgagaaagtacagaacggcagcaaagagaggaagcatcacaggtcgttca
actcagaattctaatttaactgttgaagctctcgctaaacatgaagaaagacacgatgac
gatggcgacgtggagcttaaagaggacgaaggattcagtgtgaagagtggacaaacgttt
ggtgctttcagcattagtggcttaacggactgttccaatcctgtgtttgctactgtgaag
agattttgggattctccttcatcacaacacaaagaggtttgtgctgttttggctgcagtc
actgaggttatcaaatcaaaaggtggcaaggaatctgaaacagagtattttgctgccctg
atgactgccttagagtcagctgatgagatggaagcaagagtagcaataacatttttgttg
agtttggttattaaaagtgtccctgatgctattcttcaatcaaaattctccaagtcttgt
caagttcttgtcaagataatggcatctcatgctgctgatggaaccccaggacttcttaga
cctctgcttgcctgtctgtgcagattactcagtgttcaggaaggggctgtttggtcagaa
tcatcaacaataacgacctacaatggagtattgagctttatggttcataataaaccaaag
gtccgaaaagcagcacaggaggcagttaaagtactgttagagaagccaccaggagatatg
acacatcaccctgcttgtggggcaacagctaaattctgtgttcaacaaatcgaagaaaat
ggagggtcttcacaaggtacagccaccactttacacatcattggtattctaaaggaaata
ctcccttgtcttcctgtacagaatgtgaagaccatttgtgagtgccttttaaagctgatg
acattaggaaatgtgatggtgacagtgaattctcttcaagccatttataagctgctctgt
gcaaacccagacaccacaacactgagcaagcagcttaatgctcagctaatcaatgctcta
tatgattaccaacctagtgtcaatgacagcaatccatcacaagcttggatttcaactatg
gagaaggcttatgttaacctcgcgagattagatgctactctttgctacaaccatctgcca
agatttttttcttcgttgatgagttactttctatcagatcaacgagttctctcaaaagct
gcacaggacacaatgagtattttacttcaagagtgtcttgctccagttgctaaagaagtc
tgtgcagagatcaccaaatcttcgggtgcaagcgctaccccgttacacaaaattataaaa
tgcatagagtcaggtcttcagtatcgttatcaaggatcatggtctgtgattttagaggtt
gtcagagtctcattcgaggtcctagggaaccagtgcccaaaattgctaagaaagcttcta
gtttccctctgtgacttgcggggcacacatcaattcccttatgtcaacaagttggaccga
gccgtcggcatggctatacagaaaatgggaccaagggttgttttagaagctgtgcctctt
caactcgacaaggaaataggtggaccttgcaactttccacgcagctggcttctgcctgtt
ttgaaagataacatcaaagacaccgagttaaaatacttctttgaagttttgctgccactg
tcagctgatctgagggccaaagctacaactctcaaggaagcagggaaactactcgagagt
aaagtatatgacactttgcaactacagatatgggctcttttaccaggattttgcactcga
ccgaccgacatatgcctgtcattcaagtctgtcgctcgaatattgggcacggcccttaca
gagagagcagacttacgttcaacagtgtgccaagctttgaggctgcttatttccaaggtg
tcggatgatgcaagcaaaaaggagttatcccaatactcaaagaactaccttccaatcctg
tttaacttgtacactgcggaagacaatgaaggggatgctgataaactggcaatactggag
acaatcagagtttacctgagcataacagatcacaaactcgtggccacgttcttctccaag
ggtcttgaaaagttaaccgacggtaaaagcaacggaaaatcacgacatttgatgatggac
ttagttatcgcgatggtgccctatgtggatgggcaaaatataaagaagctctatgatttg
gcgtcgccatggttacaggccacagatattacgcagcagaagaaggcttatcgcgtattg
gaacagatttgtggcgctgaatctgagagcagccaagagttcgtcgtttcacatcttagc
gaacttcaagaaattcttttaaagacattagcggcgtcaagttcagcttctaaaactccc
cgtttgcgctgccttgctcatataattaaaaaggtggaagaccctgcagagtttattcaa
gccataattcctgaggtgatactttgttccagagaagtttctgttaaagctcgcacatcg
gccttgaccttactgattgaatgctgcaacgccaacttccgttcgtcgggcaagacaaga
caagaatgtttgatctcttttctggagttggtagttgcgggcatcgcgggctcaccgcac
atgataagtgccactatcatatccctgtctaaggtcgtgtacgagtttcgacacgatgtt
cccagtgctttgctggagaaacttatacaaggtattttagtttgtctgcgatccactgct
agggaggtgatcaagtcatgtctaggcttcttcaaggttatcatatctgttatgaaccaa
caggacttgcttccctatctccaggaactcattggtggtctggtagcctggaacgatgat
gcccgtcggcgctttcgcttcaatatcaaagttctgttcgaacgtctcctcaggaagttt
ggataccaaacaatctacaagtgtacccctgaagaacatcaaaaattagttcacaacact
tacaagacaactcagagactaaagaggcagaaaatggcggcaaggagagacagaaaatcc
cacgaggacaaagaaggattcgatcaagaatcgccacaacttgaaagttatgaagatctt
atgtttggagaagatgaagaggaggagagacctggtatgaagaaaaagaaacaggctgcc
aaaaaaggtcaagccggtgaacgtgtgaaaggtccaaaagcctggatccgagagggaact
gaagaagagcctgtggattttcttgacccgggagtggtgcagagggttgtggcaacggat
ccaaaaaagcctaccaaacgtaaagcaacagatgatttccaggtttcttccgatggaaag
ctcatcatccaagataacgaggacgaggaggaacaacacgagcctggatccaagcgtaag
agaaaatcaggtccggaggaccccgtggaggatatggaagaggatccattcccagggaaa
aagaagcggaaatcttttggtggtagtaatgaagatgatgcgctcgttgaagaggttcct
tcgagacgtgaaaagagtgataaggcgtttggagctgagtacaaagcgaagaaagcgggc
ggtgatgtgaagaagaaaggaaaaccagatccgttcgcttatgtgcctctccaattaaat
atgctcaacaagaggaagcaaaagaaaatgacgggccagtttaagggcctggtacgagct
acaaaacgcggagcagcgaacgtcaagcaaaagaaaggaaaaagatga
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