Pocillopora damicornis (lace coral): 113684055
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Entry
113684055 CDS
T05773
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113684055
09123 Folding, sorting and degradation
03018 RNA degradation
113684055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113684055
03041 Spliceosome [BR:
pdam03041
]
113684055
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113684055
mRNA degradation factors
5'-3' decay
Lsm complex
113684055
Spliceosome [BR:
pdam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113684055
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
113684055
NCBI-ProteinID:
XP_027057155
LinkDB
All DBs
Position
Unknown
AA seq
108 aa
AA seq
DB search
MEWLPRIHFHSIMATTLETYVNHTVAVITQDGRMIVGTLKGFDQTVNLILDESHERVFSS
GSGVEQVMLGLYIIRGDNIAVIGEIDEEADANLDLSSIRADPLNAVVY
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggagtggttaccaaggattcattttcattccatcatggcgactactctggaaacgtat
gtaaatcatactgtagcagtaatcacacaggatggaagaatgattgtgggaacccttaaa
gggtttgatcaaacagtgaatttaattttggatgagagccatgagagagtgttctcttca
ggaagtggagtggaacaggtcatgttgggtctttacatcatcagaggagataatattgct
gtcataggagaaatagatgaggaagcagatgctaacttagatttgagtagtattcgtgct
gatccacttaatgctgtagtttactaa
DBGET
integrated database retrieval system
