Pocillopora damicornis (lace coral): 113684398
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Entry
113684398 CDS
T05773
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03030
DNA replication
pdam03410
Base excision repair
pdam03420
Nucleotide excision repair
pdam03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113684398
03410 Base excision repair
113684398
03420 Nucleotide excision repair
113684398
03430 Mismatch repair
113684398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdam03032
]
113684398
03036 Chromosome and associated proteins [BR:
pdam03036
]
113684398
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113684398
DNA replication proteins [BR:
pdam03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113684398
DNA Replication Termination Factors
ELG1-RFC complex
113684398
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113684398
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113684398
Check point factors
HRAD17(Rad24)-RFC complex
113684398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_24
DNAX_ATPase_lid
AAA_16
AAA_5
DEAD
AAA_14
DUF815
ResIII
AAA_7
TIP49
PhoH
AAA_30
Thioredoxin_6
Mg_chelatase
Gp44_lid
AAA_19
AAA_2
AAA_3
bpMoxR
AAA_28
MCM
ATPase_2
UBA_Rad5
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
113684398
NCBI-ProteinID:
XP_027057565
LinkDB
All DBs
Position
Unknown
AA seq
330 aa
AA seq
DB search
MVVPEQKRNLPWVEKYRPNSLEDLISHRDIITTIKRFIEEDRLPHLLFYGPPGTGKTSTI
LAVAKQIYSPREFNSMVLELNASDDRGIGIVRGAVLNFASTRTIFKSGFKIVILDEADAM
TQDAQNALRRVMEKFTENTRFCLICNYLTKIIPALQSRCTRFRFGPLDNEQMKSRLEHVI
KTEGVQVSDDGMKSLVRLANGDMRKALNILQSTSMAFSIVDEVNVYTCTGQPLRSDIANI
VEWMLNEDFNTAYSNITKLKTLKGLALQDILTEVHLYVHRVNFPQKIRIHLLEKMADVEY
RLAAGTSEKIQLSSLIAAFQVARDMVTPDS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttcctgagcaaaaacgaaatctcccctgggttgagaagtacagacccaacagt
ttggaagatctaatctcccaccgggatatcatcacaacaatcaaaagatttatcgaggaa
gatcgattgccccatctgttattttatggtccacctggaactgggaagacatcaaccata
ttagctgttgctaaacagatctactctccaagagaattcaactccatggttcttgagttg
aatgcttcagatgatagaggtattggtattgttcgaggagccgttttaaactttgcaagt
acaagaacaatttttaaatctggttttaaaattgtaattttggatgaagcagatgctatg
actcaggatgcacagaatgccctacgaagagtcatggagaaatttacagagaacaccaga
ttctgtttgatctgtaattatctgacaaagattattccagctctccagtctcgttgtaca
aggtttagatttggacctcttgataatgaacagatgaagagtagattggaacatgtcatc
aaaactgaaggagtacaagtttctgatgacggaatgaaaagtttggtcaggctggcaaat
ggtgacatgagaaaagctctgaacattcttcagagcacttccatggcttttagcattgtt
gatgaggtgaacgtatacacctgtacagggcaacctctgagatcagacattgcaaacata
gtagagtggatgcttaatgaagacttcaatactgcttatagtaatataacaaaactaaag
actctgaaaggacttgccctacaagacattctcacagaagtacacctgtatgtacataga
gttaactttcctcagaaaatcagaattcacttgttggaaaagatggcagatgttgagtac
cgtctagcagctggaacctcggagaagattcagcttagttcactgatagcagccttccaa
gtagctagggatatggttacacctgactcatag
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integrated database retrieval system
