Pocillopora damicornis (lace coral): 113684444
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Entry
113684444 CDS
T05773
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K04734
NF-kappa-B inhibitor alpha
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04519
Cadherin signaling
pdam04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
113684444
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113684444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113684444
04131 Membrane trafficking [BR:
pdam04131
]
113684444
Transcription factors [BR:
pdam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
113684444
Membrane trafficking [BR:
pdam04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
113684444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
NdhM
BMP2K_C
Motif
Other DBs
NCBI-GeneID:
113684444
NCBI-ProteinID:
XP_027057621
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MDSTTSGQRKLTPRGAMPTGLVRQKMLAVPHADGKVVSASSQCDSGFGDDEELRSRSIER
NNEFTSLRSVEERTENLSIEDPDTDNRHPSLESQDSSLLKNEELYLNYAHTNDVRYLLAQ
DHVRKQLYLQDDDGDTALHLSIINMKPMETDAIISVAPCRECLDIYNDLKQTPLHLATIT
RQPAAIRRLLEAGASPNIPDRNGRTALHLACDQGDIDCVKEILRPLHDKRWGDEMKEKVY
NMLHERDYEGFAALHKAVFVSSVQIATYLVSLGANVNIQDAKSGRSPLHHAVEAGNLSMI
NCLLYQCSADPDAMTFGEVTPLHIAAGRGMEAVVALLLAAGSDPSLTNYEGESPLNIAAS
KQVITSGALMLKSLRFMTW
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggattcaactacaagtgggcaacgaaagctgactcctcgcggagcgatgccaaccggt
ctggtacgacagaaaatgttagcagttcctcatgcagatggaaaggttgtaagcgccagc
agtcagtgtgactctggatttggtgacgacgaagaattacgctctcgaagcatagaaaga
aacaatgaattcaccagcttgcgcagtgtagaggagaggaccgaaaatttgtcgatcgag
gaccctgatactgataaccgacacccttccttggaatcacaagattcatcgcttctgaaa
aacgaagaactttatctaaactatgctcacactaatgacgtgaggtatctattagcccag
gaccatgttagaaagcagttataccttcaagacgacgatggtgacacagctcttcatttg
tcgattataaatatgaaaccaatggaaacagatgcgataatctcagttgcgccgtgtaga
gaatgcctcgacatttacaacgatctgaaacagacacctcttcacctagcgacaatcacc
cgacagcccgccgcaatccgcagacttctggaagccggagcttcgccaaacattcccgat
cgcaatggtagaacagctttacatttagcttgtgatcaaggagacattgactgcgtaaag
gagattttaagacctctgcacgacaaacgatggggtgacgaaatgaaagagaaagtatat
aacatgcttcacgagcgagactacgaaggttttgccgctttacacaaggctgtatttgta
agcagtgtacaaattgccacttatctggtgtctcttggggctaatgttaacattcaggat
gctaaaagtggacgttccccacttcatcatgcagttgaggctggtaacttgtccatgatc
aactgccttttgtaccagtgcagtgcagacccagatgccatgacatttggtgaagtgaca
cctcttcatattgctgcaggacggggaatggaagctgtggtagctctgttacttgctgcc
ggttctgatccaagcctaacaaactatgagggtgaatcacctcttaatattgctgcctct
aaacaggtgattactagtggagcccttatgttgaaatctctcagattcatgacatggtga
DBGET
integrated database retrieval system
