Pocillopora damicornis (lace coral): 113684911
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Entry
113684911 CDS
T05773
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03420
Nucleotide excision repair
pdam04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113684911
09124 Replication and repair
03420 Nucleotide excision repair
113684911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdam04121
]
113684911
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113684911
Ubiquitin system [BR:
pdam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
113684911
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113684911
TCR (transcription coupled repair) factors
Cul4-CSA complex
113684911
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF_A
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
113684911
NCBI-ProteinID:
XP_027058131
LinkDB
All DBs
Position
Unknown
AA seq
1160 aa
AA seq
DB search
MAHNYVVTAHKPTAVNAAVVGNFTAPDDLNLIIAKNTRLEIHVVTPEGLRPHLDIGIYGR
ISVMELFRPPNEPQDLLFILTARYRVFILSYKSESGDVVTRACGDVQDRIGRPSDTGLIG
IIDPESRMIGLRLYDGLFKVIPLELDSNKELKAFNIRLEELHVIDIAFLHGCQVPTIVFI
YEDPHGRHVKTYEIVLRDKEFSKGPWKQDNVEVEASRVIAVPEPLGGALIIGQESITYHK
GANYHAIAPPALKQSTITCYGKIDANGSRYLLGDMNGRLFMLLLERQELMDGNVEVKDLK
LELLGETTIALCLTYLDNGVVFIGSAMGDSQLVKLNTETNENGSHVHVMETFTNLGPIVD
MVVVDLERQGQGQLVTCSGALKEGSLRIIRNGIGIHEHATISDLVGIMGIWPLRLQKTAK
NFDDALLLSFVGQSRILALAGEEVEETEIPGFDDDQQTYFCGNVSGDQIIQVTTLSVRLV
NCETRELVCEWRHPGGKNISVCACNSGQLVLAVGCELYYLEIIAGNLNLISHTTLEHEVA
CLDITPTYDSDTRAQLVAVGLWTDISVRVLKLPGCEQLFVEMLGGEIIPRSILKTSFEGI
HYLLCALGDGTLFYFTMDPNTGSLSERKKVTLGTQPTMLRTFKSLSTTNVFACSDRPTVI
YSSNHKLVFSNVNLKEVNYMCPLNSEGFPDSLAVASEGALTIGTIDEIQKLHIRTVPLGE
TPRRIAYQESTQTFGVISMRVEVLDPASNTTRPLHPSASTMAQNITTSVSAGMPGTSAGS
SAGGRGVADGITFGDEVERSSLLIIDQHTFEVTHAHDLQDHECATSLISCTLSGDPNSSY
SSGTSNTYYCVGTAYVFPEEAEPKTGRLILFQLLEGKLVQVADKEVKGAVYSLVEFNGKV
LAGINSTVSIYEWTADKELRVECSFLNNILALYLKSKGDFILVGDLMRSMTLLTYKAMEG
SLEEIAHDYSPNWMTAVEILDDDTFLGAENSFNLFTCQKDSGSAADDDRSYLQEAGQFHL
GEFVNVFRHGSLVMEHPGEASTPFQGCVLFGTVNGTIGIVAQLPQELSAFLTQVQGKLSK
VIKSVGKIDHSFWRCFSNERRVEPATGFVDGDLIESFLDLPRSSMEEVASGLQIDDGSGM
KKECTVEDLVKVVEELTRIH
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctcataactatgtagtgacggctcataagccaacggccgttaatgctgctgtagtt
ggtaattttacagccccagatgaccttaatttgatcattgcaaaaaacactcgtctagag
atccatgttgtgacaccagaaggcctgagaccgcatcttgacatcggaatatacggacga
atttctgttatggaactgttcagacctccgaatgaacctcaggatttgttatttatttta
acggcaaggtacagggtgtttatactaagttacaagtcagagtctggagatgttgttacc
agggcttgtggggatgttcaggacagaattggcagaccatccgacactggtttgattggt
atcatagaccctgagtcacggatgatcggtcttcggctttatgatggactttttaaggtg
attcctctggaactggattcaaacaaagaactaaaagcattcaacatcaggcttgaagag
ctgcatgtgattgacattgcatttctacatggctgtcaggttcccacaattgttttcatt
tatgaggatcctcatggacgccatgtaaaaacttatgagattgtactgcgtgataaagag
ttcagcaaggggccttggaagcaagacaatgtggaggtggaggcttcaagagttattgca
gttccagaacctcttggaggggcacttatcattggacaggaatcaataacataccataaa
ggggccaattatcatgcaattgctccaccagctctgaagcaaagcaccataacatgctat
gggaagattgatgctaatggttcaaggtatctcttgggtgacatgaatggtcgacttttt
atgttactgctggagagacaggaactgatggatggtaacgttgaagtgaaggatctgaaa
ctggagcttcttggagagactactattgcactctgtctcacatacttggacaatggtgtg
gtatttattggttcagcaatgggagactcacaacttgttaagctcaacacagaaacaaat
gagaacggctcacatgttcatgtgatggagacattcaccaaccttggtcctattgtagac
atggtggtagttgacttggaaagacaaggacagggacagctggtgacatgttctggtgca
ctgaaggaaggctcattaagaataataaggaatgggattggtattcatgagcatgccacc
atatcagacctcgttggcattatgggtatctggcccctaagattacaaaagacagccaaa
aactttgatgatgcactgctcctatcttttgttggccagagcagaattctagcccttgct
ggtgaagaagttgaagagacagagattccaggttttgatgatgatcaacagacgtacttt
tgtggaaatgtttcaggagatcaaatcatccaggttacaacattgtcagtgcgtcttgtg
aattgtgagaccagggaacttgtttgtgaatggcgacatcctggtggtaagaacatcagt
gtctgtgcgtgcaactctggacagcttgtgctggccgtgggttgtgaattgtattatctg
gagataattgcaggaaaccttaatctgatcagccacacaacacttgaacacgaagttgct
tgtctggatatcacaccaacttatgattctgacaccagagctcagttagtagcagtagga
ctgtggacggacatttcagtgagagttctaaaactgccaggctgtgaacaactgtttgtt
gaaatgctgggaggagaaataattcctcgctccatactcaagacatcttttgagggtatt
cattaccttctctgtgctttgggagatggaaccttgttttatttcaccatggatccaaac
actggatctttgtctgagaggaagaaagtaaccctcggcacacagcctacaatgcttaga
acattcaagtcactgtccacaacaaatgtgttcgcctgctctgatcggcccacagtgatc
tattccagtaatcacaaacttgtgttctccaacgttaatctaaaggaggtgaattatatg
tgtccactgaactccgagggattcccagacagtcttgctgtggctagcgaaggagcgtta
acaataggaacaattgatgaaatccaaaaacttcacattcggacagttccattgggagaa
acgcccaggcgtattgcttaccaagagtccacacaaacatttggtgtaatctcaatgcga
gtagaggtcctggatccggcgtcaaatacaactcgacccctccaccccagcgcgagcact
atggctcagaacataacgaccagtgtgtcagcaggcatgccgggcacttccgccggaagt
tcagccggtggtaggggtgtggcagacggcataacatttggtgacgaggtggagagaagc
agtttgttgatcattgaccaacacacatttgaagtgactcatgctcacgatcttcaagat
cacgagtgtgctacaagcctgatctcttgcacactatctggtgaccctaacagctcctac
tcgagtggaacgtccaatacgtattactgcgttggcactgcgtatgtcttccccgaggaa
gctgagccaaagacgggacgtttgattttatttcagctcttggaaggtaaacttgtccaa
gtcgctgataaagaagtcaaaggtgctgtgtactcactggtggaatttaacggaaaagtc
ttggccggcattaacagcacggtcagtatatacgagtggacggctgacaaagaattacgt
gtggaatgcagctttttgaacaacatcttggctttgtatctcaagtctaaaggggatttt
attttggtgggtgacttaatgagatccatgacactgttaacttacaaagcaatggaggga
agtctagaagagattgcgcatgactatagtccaaactggatgacagcagtagagatccta
gacgatgatacgttccttggggctgaaaactcttttaacctgttcacctgccaaaaggac
agcggctccgcagctgatgatgacagatcgtatcttcaggaggctgggcagtttcatctt
ggcgagtttgttaacgtctttagacacggttctcttgtcatggaacatcctggtgaagcg
tcgacccctttccaaggctgcgtcctttttggaactgtcaatggaacaattggaatcgtc
gctcaattacctcaggaactgagtgcttttttgacgcaagtccaagggaaactcagcaaa
gttatcaagagcgtcggaaagattgaccacagcttctggcgctgtttttccaacgaacgg
agagttgagcctgccaccggctttgtggacggagatttaatcgaaagtttcctagaccta
ccgcggtccagtatggaggaggtagcctcgggactacaaattgatgatggtagtggtatg
aagaaagagtgtactgtggaagatctcgtgaaagttgttgaagaacttacaaggatccat
tag
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integrated database retrieval system
