Pocillopora damicornis (lace coral): 113685024
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Entry
113685024 CDS
T05773
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113685024
09123 Folding, sorting and degradation
03018 RNA degradation
113685024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113685024
03041 Spliceosome [BR:
pdam03041
]
113685024
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113685024
mRNA degradation factors
5'-3' decay
Lsm complex
113685024
Spliceosome [BR:
pdam03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
113685024
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
113685024
NCBI-ProteinID:
XP_027058272
LinkDB
All DBs
Position
Unknown
AA seq
100 aa
AA seq
DB search
MATERKKKESIFELSKFLDKRVRVKFQGGREATGVLKGFDALLNVVLDNTTECLRDPDDP
FKLTDETRQLGLAVCRGTAVVLICPVDGMEPIANPFLQQE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgaaagaaagaaaaaggagagcatatttgagttgtccaaatttcttgataaa
agagttcgagtgaaatttcaaggcggaagagaagctacaggtgttttgaaaggttttgat
gccttactgaatgtagtgttggataatacaacggaatgtttaagagatcctgatgaccca
ttcaaactcactgatgagacaaggcaattgggcctggctgtgtgcagagggacagctgtg
gttttaatttgtcctgttgatggcatggaacccatagcaaacccattcttgcaacaagaa
tga
DBGET
integrated database retrieval system
