Pocillopora damicornis (lace coral): 113685365
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Entry
113685365 CDS
T05773
Name
(RefSeq) mismatch repair endonuclease PMS2-like
KO
K10858
DNA mismatch repair protein PMS2
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03430
Mismatch repair
pdam03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113685365
03460 Fanconi anemia pathway
113685365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdam03400
]
113685365
DNA repair and recombination proteins [BR:
pdam03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
113685365
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
113685365
NCBI-ProteinID:
XP_027058674
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MAAISSSPVVQAIDQKSIHQICSGQVVLSIATAMKELVENSLDAGATNIEIKLRNHGADV
LEVIDNGCGVEPHNFEALTLKHHTSKLKDFSDLASVETFGFRGEALSSLCALSKLIIVTH
HSSQTVATRLEYDHNGKLLSKNPCARAVGTTVSLENLFSTLPVRHREFLRNIKREFSKLA
HVLQGYCLVSTGVRIMCSNQVEKGKKTTIVSTNGSDQVKDNITCVFGPKQVQTIMAFEQS
APNEEDCNEIGLDAAKTDLQNNPFHITGYISKPDHGMGRSTADRQFLYINKRPCELSKVL
RVINEVYHTYNRHQYPFVMLDITLARDGVDVNVTPDKRQVFVQEEKVLLATMKSSLKRMF
DPCTASFDVNQKPLMQITLAESFSAKEANNVTFPENEQLRNQKGTGSTVNKDAKVSQSVE
PMLISRPGVSEERMRFPSLSSFKRKFSAVDGYVKNKPKEPCSKQARLTSMFSRVGGLSNR
SHNVGLRSDRKHTTVINGHGDDEELREDGRSNEHVIEVQDELDTKNFVKEKYILDHNNED
CTVQRESDSVVRVSEVRDTPCGATVSDDNSVEESSSRCPASSQSFSFINESGENSQNDPE
PVNENQCSYKNVDGRDDAMKSLLVTPKRPNASSTKQVASGSFRDRKESTVNFCMDNLITN
VKKPQREKTRAVEARLFKAKIAPESNSSAESELRKNISKDMFKRMEILGQFNLGFIIAKL
DNDLFIIDQHASDEKYNFEDQQRNTTIRSQRLIVPQKLELTAANEAILMDNVDIFRKNGF
EFEIDANAEAMRKVKLSSLPMSKNWTFGVEDIEELIFMLSDSPGIMCRPSRVRKMFASRA
CRMSIMVGTALDQAQMKKIVCHMGEIQHPWNCPHGRPTMRHLVNLGMLPSSDCH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatatcatcatctccagttgtccaagcaatcgatcagaaatctattcaccag
atttgctctggtcaggttgttttaagtattgcaactgcaatgaaagagcttgttgaaaat
agcttggatgctggagccaccaacatcgaaatcaaactacgaaatcatggcgctgacgtt
ttagaggttatcgataatggctgtggggtagaaccccacaatttcgaagcgttgacttta
aagcaccatacctcgaagctaaaagatttctccgatctcgcaagcgtggaaacgtttggt
ttcagaggggaggcactaagctccctttgtgcgctgagcaaacttataatagtgacacat
cactcgtcccagactgtggcaacaagactagaatatgatcacaatggaaaactgctttcc
aagaacccttgtgctagggctgttggcaccactgtgtcattagaaaaccttttttcaact
ttacctgtacgccatagagagtttctcaggaacatcaaaagggagttctcaaaactagca
catgtccttcaaggatactgtcttgtaagtacaggtgtgaggataatgtgcagtaatcaa
gtggaaaagggaaagaagacaacaattgtgtcaacaaatggaagtgatcaggtgaaggat
aacataacctgtgtctttggaccaaagcaggtacaaactataatggcttttgaacaatcg
gcgccaaacgaagaggattgcaatgaaatcggccttgatgcagcgaaaactgacctacag
aacaatcccttccatatcacgggctatatttcaaaaccagatcacggcatgggacgtagt
actgctgatcgtcagtttttgtacattaacaaaagaccttgtgaactatccaaagtgctc
agagtcataaatgaggtttatcacacttacaacagacatcaatatccttttgtgatgcta
gatattaccttagcaagagatggagtggacgtgaatgtgactccggacaaacgacaggtt
tttgttcaggaggagaaggtgctcctggccacaatgaaatcatccttgaagagaatgttt
gacccttgtacagcttcatttgatgtcaatcaaaaacctctgatgcaaataacactggcc
gaatctttctcagcaaaagaggctaacaatgtgactttccccgagaacgagcaacttcgt
aatcagaaaggtacgggctctacagtcaataaagatgctaaagtatcacagtctgtcgag
cctatgttgatatccagacctggtgtgtctgaagagagaatgaggttcccttccctcagt
agttttaagaggaaattctcagctgttgatggatatgttaagaacaaaccaaaagaaccc
tgcagtaagcaagcaaggcttacttctatgttttctcgggttggtggtttgtcaaatcga
agccacaacgtgggactacgatctgacaggaaacatacaaccgtaattaacggccacgga
gatgatgaagaactcagggaagatggcagaagtaacgaacatgttattgaagttcaggac
gaattagacacgaagaactttgtgaaagagaagtatatccttgatcataataacgaggac
tgtacagtacagcgtgaaagcgacagtgtagtaagagtgagtgaggtaagggacacacct
tgcggagcgactgtttcagatgataattctgttgaggagagtagttcaagatgtcctgct
tcttcccaaagttttagttttataaacgaatccggagaaaacagccaaaatgatccagag
cctgtgaatgaaaatcaatgctcttataaaaatgtggatggcagggatgacgccatgaag
tcgttacttgtaactcctaaacgtccgaatgcttcaagtacaaaacaagttgcttccggt
tcatttagagaccggaaggaaagcacagttaacttttgtatggataatctgataactaac
gtcaagaaaccgcagcgagaaaaaacaagggctgttgaagctcgcttgttcaaagccaag
attgctccagagagcaattctagtgcagagtcagagctgagaaagaatattagcaaagac
atgtttaaacggatggaaattctaggtcagttcaatttgggtttcatcatcgctaaactg
gacaatgatttgtttataatcgatcagcatgcatcggatgagaagtataactttgaagat
cagcagcgcaataccacaatcaggtcacagcggctcattgttccacagaaacttgaacta
actgctgctaacgaagccatcctcatggacaatgtggatatatttcgaaagaatgggttc
gaatttgaaattgacgcaaatgctgaagcgatgaggaaggtcaaactatcttcgcttcca
atgagcaagaactggaccttcggcgtggaggatatcgaagaactgattttcatgttgagt
gattctcccggcattatgtgcagaccttccagagttaggaagatgtttgcgagccgtgca
tgccgtatgtctatcatggttggaacagcattggatcaagcccagatgaagaagattgtc
tgtcatatgggtgagattcaacatccgtggaattgccctcatggccggcccaccatgaga
catttggtgaaccttggcatgctgccatcatcagattgccattga
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