KEGG   Pocillopora damicornis (lace coral): 113685695
Entry
113685695         CDS       T05773                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K19719  collagen type II alpha
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113685695
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pdam00536]
    113685695
Glycosaminoglycan binding proteins [BR:pdam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113685695
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 113685695
NCBI-ProteinID: XP_027059030
LinkDB
Position
Unknown
AA seq 1096 aa
MLEPEEQEVASQKIGLPGDPGEKGDRGDQGIAGLAGPRGNRGEPGAPGADGPKGEPGVTG
PRGPPGPPGPIVDVSPTGVPGPDAGPIGHVILSSDSKGPGATRIQEIRGDKGARGAIGEA
GNPGPRGPDGAQGEPGATGAIGSPGTAGSPGSNGSPGEPGQAGSDGQPGPPGQLGDIGDP
GASGQTGLPGAPGLRGVKGDMGSQGERGDRGETGEGGEQGPSGEVGRDGQDGVKGDQGTR
GNPGELGAPGDRGPTGPAGASGPEGAAGSPGPSGNSGSPGALGAKGNRGLMGRAGPRGGR
GAPGAEGAKGPGGEPGNPGKNGAPGEPGFKGEQGTMGPTGPVGLIGNAGPDGLTGIPGEP
GRRGEQGAPGVPGRRGLEGAKGQLGSAGTAGPPGQPGPQGKRGSPGKTGLPGGLGSPGPI
GPSGNRGYSGAEGRQGVKGDSGRNGENGRDGGKGEQGSQGEPGNPGRSGPRGDTGAAGKP
GKSGSQGIPGVDGEDGTPGIPGVPGPQGAPGTPGFSGPKGAVGNAGRDGSIGERGADGLK
GEQGATGEFGKSGTPGLAGRQGFRGDPGAQGSMGATGPLGIQGLPGAPGKLGNPGFPGTR
GKDGSPGLQGERGPRGEQGPIGAQGAAGREGENGLPGSDGLPGDRGAIGASGGSGPEGGP
GLPGLPGRAGFTGTKGDYGEKGNQGSAGEPGRDGEPGGDGAPGAVGQPGLPGPKGTDGTP
GVPGRRGDRGATGGRGSVGAPGSPGIPGSPGPTGPQGLIGLKGNAGEKGSKGESGPFGSK
GEPGDLGTVGFLGAKGNPGSPGASGNRGATGSQGRPGSQGPPGPPGNSGLTGQPGIPGTK
GSRGASGKPGVPGLPGRPGIPGRDGLRGLSGTDGRPGSTGPIGARGPKGDVGPQGLVGIP
GRRGRFGPPGAKGVKGEAGFDGSPGEGGREGYPGARGPSGEKGANGSPGTPGANGENGQS
GIGGTEGDNGPRGSPGVDGTVGVPGPMGSAGAKGPQGPQGDNGDPGRNGNFGQVGKPGNN
GPRGYRGDTGENGLIGTQGDPGYTGEVGRTGPPGIDGEDGPEGRNGSTGPEGPKGGMGAA
GPPGQPGVQGPEVFKC
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgctagaacctgaggaacaagaagtagcatcacagaaaattggactaccgggagatcct
ggagagaaaggagacaggggtgatcaaggaattgcaggacttgctggacctcgtggaaac
cgtggagaaccaggtgcgccaggtgctgatggaccaaaaggagaacctggtgtgactgga
ccacgtgggccgccaggtcctcctgggcccatagttgatgtttctcctacgggagttcct
ggaccagatgcaggtcctattggacatgtcatcctgtctagtgattcaaagggccctgga
gctactaggatccaggaaatcagaggagacaagggtgcccgtggtgctattggagaggca
ggaaatccaggacctagaggacctgatggtgcacaaggagaaccaggagcaacaggtgcc
attggttctcctggaacagcgggaagcccaggatctaatggatctcctggtgaacctgga
caagctggcagtgatggtcaaccaggaccaccaggacagttaggggacataggggaccct
ggagcatctggacaaactggtctgcctggtgcaccaggtcttcgcggtgtgaagggtgac
atgggatcacaaggagagcgtggtgacagaggagaaactggagagggtggagaacaaggt
ccatcaggtgaagtaggaagggatggacaagacggagtaaagggagatcaaggaactcga
ggaaacccaggagaactgggggcacctggtgatagaggtcccacaggaccagcaggagca
agtggacctgagggtgctgcaggttctcctggtccgagtggtaacagtggatcaccaggt
gccttaggggctaaaggaaatcgtggcttgatgggcagagcaggtcccaggggaggcaga
ggagctccaggagctgagggtgcgaaaggaccaggtggagagccaggaaatccaggcaaa
aatggtgccccaggagagccaggttttaaaggagaacagggtacaatgggtcctacagga
cctgttggccttattggaaatgctggaccagatgggcttactggcattcccggtgaacct
ggtaggcgtggagaacagggagctcctggagtacctggaagaagaggactggaaggagcc
aaaggacaattgggtagcgctggaactgcaggtccacctggacaacctgggcctcaagga
aaacggggatcaccaggaaaaacaggactaccaggaggacttggttccccaggtccaata
ggtccttctggtaatcgaggctattctggtgcagagggaaggcaaggagtgaagggtgac
agtggtagaaatggagagaatggacgggatggaggaaaaggagaacagggatcgcaaggg
gaacctggtaatccaggccgatcaggacctcggggagacacaggtgctgcaggaaaacca
ggaaagtcaggctctcaaggaattccgggtgttgatggagaggatggtacccctggaata
cctggggtccctggccctcaaggagcaccaggaacaccaggtttctctggtcctaaagga
gcagtgggtaacgctggaagagatggaagcataggagaacgaggagcagatggtcttaag
ggtgaacaaggtgccacaggagagtttggtaaatcaggcacaccaggactggcgggtcga
caaggtttcagaggagaccctggtgctcaaggaagcatgggagcaacgggaccgcttggt
atccaaggactccccggtgcacctggtaaactaggaaatccaggattccctgggacgcgc
ggcaaagatggctcaccagggttacagggtgaacgtggaccaaggggagagcagggtccc
attggagcccagggagctgccggccgtgaaggcgagaatggattacctggatcagatggt
ctgccgggagacagaggagccataggggcctctggtggatcaggtcctgaagggggaccg
ggtttgccaggtctgcccggtcgagcaggatttactggaactaagggtgattatggagag
aaaggcaaccaaggttctgctggagaacctggcagagatggtgaaccgggcggtgatggt
gccccaggagctgttggtcaaccaggtttgccaggacctaagggcacagacggaacacca
ggagtcccaggaagacgaggagatcgtggagccacgggaggccgcggatcagttggtgcc
cctggaagtccaggaattcctggatccccgggaccaactggccctcaaggacttattgga
ttaaaaggaaatgcaggcgaaaagggttcgaaaggagagtcaggcccatttggatcaaaa
ggagaaccaggggacttgggaactgtgggatttcttggcgccaaaggaaatcctggatct
ccaggagcttctggtaacagaggagccacagggtcacaagggcgacctggatcgcagggc
ccaccgggaccacctggcaatagtggtttgacaggacaaccaggaatcccaggaactaag
ggctcgcgtggcgctagtggtaaaccaggagttccaggcttaccaggaagaccgggaata
cctggacgtgacggcctacggggattatctggaaccgatggaagacctggttcaaccggt
ccaattggagcgcgtgggcccaagggagacgtaggacctcagggcctagttggcattcca
ggaaggcgaggaagattcggtcctcctggagcaaagggcgtaaaaggagaagccggcttt
gatgggagccctggcgagggtggacgggaaggttatcctggagctcgcggaccctctgga
gagaaaggcgcaaatggatcaccgggtacaccgggagcaaacggtgaaaatgggcagagt
ggtattgggggtacagagggtgataatggcccccggggatcccccggcgtggacggaact
gtgggagttcctggaccaatgggatctgctggtgcaaagggaccacaaggtccccaagga
gataatggcgaccctggtagaaacggcaacttcggacaagttggcaaaccaggaaataat
ggaccacgcggttacagaggtgacacgggagaaaacggtctaattggaacacagggtgac
ccaggatataccggtgaagttggcaggacaggtccccctggaattgacggagaggatggc
cctgaaggaagaaacggaagtacgggacctgaaggaccaaagggtggcatgggagccgca
ggccctcccggtcaaccaggagttcaaggaccagaggtatttaaatgctag

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