KEGG   Pocillopora damicornis (lace coral): 113685699
Entry
113685699         CDS       T05773                                 
Name
(RefSeq) collagen alpha chain-like
  KO
K19719  collagen type II alpha
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113685699
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pdam00536]
    113685699
Glycosaminoglycan binding proteins [BR:pdam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113685699
SSDB
Motif
Pfam: Collagen COLFI CDH-cyt
Other DBs
NCBI-GeneID: 113685699
NCBI-ProteinID: XP_027059036
LinkDB
Position
Unknown
AA seq 1146 aa
PKAWTSFPHQGLRGQRGPAGPAGISGPKGDAGEPGIQGRTGDLGEQGPQGIAGAKGENGR
DGASGKSGVPGEKGSVGVTGETGPQGQRGAPGNAGVPGARGSSGPPGDRGRPGRPGLRGS
KGEKGGQGPPGPIGEPGPSGSTGRRGQTGATGPPGPVGAPGAQGPPGLRGSPGPDGTPGR
KGSTGAPGENGFNGAKGDKGSAGERGEPGRVGAKGPTGQPGVPGRDGKTGAPGDPGADGS
SGAPGQQGAQGNPGPSGLTGPKGSMGEPGVDGDPGAPGAQGAKGETGAPGRRGLTGIPGK
QGRQGERGERGQTGAQGSQGAPGSQGPPGLPGKPGETGASGESGVDGTPGARGERGPQGD
RGPPGAAGAAGDPGEPGTPGADGKAGERGLQGPPGPAGSPGLAGLPGQQGRQGATGAKGS
KGDGGPVGERGPDGKDGEPGQDGMSGPPGPPGPPGEKGEDGVNGQDGTPGSRGDTGPQGP
PGNPGPPGRPGQMGTGGPPGPVGPRGPRGDTGVKGPSGPPGRPGPTGTLGQLGAPGAKGR
QGDQGQQGSPGTQGPPGKPGQPGPPGPPGNTGPSGRDGADGQKGAAGEPGRSGKDGLPGL
PGNNGKDGEPGPPGSDGGPGEVGERGPAGPKGDRGPMGPPGTPGVGGGPGPQGPKGDAGP
PGRNGRSGAPGVPGGRGPPGSKGEPGNPGADGSNGRNGTAGINGRPGLKGERGAPGEPGK
AGKPGPAGIEGPKGDQGPQGPSGEKGRRGRDGVPGKRGAPGAPGNQGPKGEKGEIGVPGE
KGDKGWTGFKGETGPNGPQGDQGAPGVEGSDGPPGLRGSPGENGNPGPPGRNGTMGEPGL
KGPDGDVGETGSSGPEGYQGPPGPPGPPGPPGEPGRPGLLEYLAIANVEKGPSFRLYSSN
GKEMPTREIKPVDILRGLDAKEKEIDLKIKPDGTRKYPARTCYDLFLDHKSYKSGMFWID
PNGGTIKDAIWVFCDKGKNSSCIYPKNSKISDLTIKVQFQDKEDKWLSQAFKESEETELL
EYDAHYTQLNFLKTFSNFANQNITYACRNSMAWEDGRYSIKLKGSNEMEYHATSKTSLRP
KVLSNGCMQSDSTGKWEKTVLEIDTRERNRLPIMDVSAYDIGGKDQDFKLEIGPACFHHT
VLSRTA
NT seq 3441 nt   +upstreamnt  +downstreamnt
ccaaaagcatggacatcttttcctcatcagggtctaagaggacaaagagggcctgcaggt
ccagcaggtatttcaggacctaaaggggacgctggcgaaccaggtatacaaggaagaact
ggagatctgggtgagcaaggtcctcaaggtatagcaggagcaaagggtgaaaatggaaga
gatggggcatcgggcaagagtggagtaccaggagaaaaaggatcagttggagtcactgga
gaaacaggtccccaaggtcaacgaggagctcctggaaatgctggtgttccaggtgctcga
ggaagttcaggtcctcctggtgacagaggtcgacctggtcgcccaggtttgcgaggatcc
aagggagaaaaaggaggccaaggacctccaggtccaattggggaacctggaccttctggt
tctaccggcagacggggtcaaactggtgcaacgggcccccctggtccagttggtgcacca
ggtgctcagggtcctcctggtcttcgtggatcacctggtcctgatggtactcctggtcga
aagggatcaactggagcacctggagagaatggtttcaatggagcaaagggagataaggga
tctgcaggtgaacgtggtgaacctggccgagttggtgcaaaggggcccacaggtcaacca
ggggtacccggacgagatggcaagactggtgcaccgggtgaccctggagcagatggttca
tcaggagctcctggccagcagggtgcacaagggaatcctggacctagtggacttactgga
ccaaaaggatcaatgggagagccaggtgtggatggtgacccaggggcaccaggtgctcaa
ggagcaaagggtgaaactggagcaccaggcagacgtgggttgactggcattccaggaaaa
cagggaaggcaaggtgaacgcggagaaagaggacagactggtgcacaagggtcccaggga
gcccctggtagtcagggaccaccaggtctacctggaaagcctggagagactggagcatca
ggagagagtggagtggatggaactccaggagcaaggggtgaaagaggccctcaaggagat
cgtggacctccaggtgctgctggtgctgctggagaccctggtgagcctggaacacctggt
gctgacggcaaagctggagagagaggtcttcaaggcccacctggcccagctggttcccct
ggtctggctggtttaccaggacagcaaggacgacaaggggccactggagcaaagggctca
aagggagatggtggacctgttggagaacgagggcctgatgggaaagatggagagccggga
caagatggaatgtcaggacctccaggacctccgggcccaccaggagaaaagggtgaggat
ggtgtgaatggtcaagatggcactcctggtagccggggtgacactggacctcaaggtccg
ccaggaaatcccggtccaccagggagaccaggacaaatgggaactgggggacctccagga
cctgttggccctcgtggaccacgtggagatacgggtgtgaaaggaccttctggacctcct
ggacggccgggccccactggaacactcggccagcttggtgcgcctggagctaagggaaga
caaggagatcagggacagcagggaagtccaggtacccaaggacctccaggaaaaccagga
caaccaggccctcctggacctccaggaaataccgggccatcagggagagatggtgcagat
gggcaaaagggtgcagctggagaaccaggccgatctggtaaagatggcttgcctgggctt
cctggtaacaatggaaaagatggtgagcctgggcctccaggttctgatggtggaccggga
gaagttggagaaagaggacccgctggaccaaagggagacagaggaccaatgggacccccc
ggcacgccaggagttggaggaggtccaggaccacaggggcccaaaggtgacgcaggccct
ccaggccgaaatggacgcagcggtgcaccaggagtacctggaggtcgtggcccaccggga
tcaaagggtgaaccaggaaatcctggagcggacggtagcaatggaagaaatggcacggca
ggtataaacggacgaccaggtttgaagggagagagaggtgccccaggagaaccaggaaaa
gcaggtaaaccaggtcctgctggtattgagggacctaagggggatcagggaccccaagga
ccttcaggagaaaagggacgtcggggaagagatggtgttcctggtaaacgaggtgctcct
ggagccccgggaaatcaaggacccaaaggagagaaaggtgaaattggtgtacctggcgag
aaaggcgacaaaggatggacgggatttaagggagagactggacctaatggcccacagggc
gaccaaggagcaccaggtgttgaaggatcagatggacctccaggactgaggggatcgcca
ggagaaaacggaaatcctggtccaccaggaagaaacggaacaatgggtgaacctggcttg
aaaggacctgatggcgacgtgggagagacaggatcatcgggacctgaaggatatcaagga
ccacccggacctccaggacctccgggacctcctggtgaaccaggtcgtccaggattactt
gagtacttggctattgcaaacgttgaaaaaggtccatcattccgattatactcgagcaat
ggaaaggaaatgccaactcgagaaataaagcccgtggatatactcagagggttagatgca
aaagaaaaagaaattgacctgaaaataaaaccagacggtaccaggaaatatcctgctaga
acgtgttacgatctgttccttgatcacaagagttacaagagcggtatgttctggatcgat
cctaacggtggaacaatcaaggatgcaatctgggttttctgtgacaagggcaagaattcg
tcgtgtatctaccccaagaactcgaaaatctctgaccttacaatcaaagtacaatttcaa
gacaaggaagacaaatggttgagccaagcgtttaaggaaagcgaagagaccgaactgctg
gaatacgacgcccactacacgcagctcaacttcctgaagacctttagcaactttgcaaat
cagaacatcacctacgcctgccgtaactccatggcctgggaagacggaagatactcaatc
aaactcaagggctctaacgaaatggaatatcatgccacatctaagacctcactcagaccc
aaagtactctccaacggttgcatgcaaagtgattctacgggcaaatgggagaaaacagtt
ctagagattgatactagagagaggaatagactacccatcatggacgtttcagcctatgac
atcggcggaaaagatcaagacttcaagcttgaaattggaccagcctgtttccatcacacc
gtcctttctcgtacggcttag

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