KEGG   Pocillopora damicornis (lace coral): 113685716
Entry
113685716         CDS       T05773                                 
Name
(RefSeq) collagen alpha-2(I) chain-like
  KO
K19719  collagen type II alpha
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04512  ECM-receptor interaction
pdam04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113685716
   04518 Integrin signaling
    113685716
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pdam00536]
    113685716
Glycosaminoglycan binding proteins [BR:pdam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113685716
SSDB
Motif
Pfam: Collagen VWA VWA_2 vWA_Rv0959
Other DBs
NCBI-GeneID: 113685716
NCBI-ProteinID: XP_027059054
LinkDB
Position
Unknown
AA seq 861 aa
MLRITFLRVLLLGLFGISATTAQRLDDPCILDLAFIIDASGSIEPYWEDVRKFAAGVAKL
VNISSDGSHVGAVKFGETSKIEFGFNEGQNENTVVRNLLNLDPPVPGSRTMLHSALEKAN
DDLFNPQTNSFREDPNVRKVVLIITDGAQTPPEKPDIPADKLKKRGFEIYAIGAGDAKSH
YRELDMLRNKDLFFVKRPSELPTKVVDVAQALCPRSIETTVIGPPGERGAFGLRGDVGAP
GRRGRTGPAGLKGFSGVKGAMGDLGDPGNPGPPGPPGSTAGLPSVPGEKGPLVLVNVVPD
IPGGRIGQPGGSGDTGPKGYEGAFGFAGITGSPGDDGRQGFQGPLGPFGEPGPDGPDGPA
GPKGRPGPEGYRGRRGPMGDPGPLGNPGPVGSKGREGRTGIAGQQGQDGELGDTGDVGKP
GPDGSVGMNGLSGVSGRPGYPGPSGFEGKEGPAGAPGTQGFKGGPGSPGAPGDPGIKGSP
GQGGDTGLMGDTGPTGESGSGGLPGTDGVTGSRGSVGKQGEFGGPGDPGPAGPTGGEGRS
GETGIPGDLGSTGGKGAKGELGRPGSTGSTGDKGPAGLAGPNGARGFQGSPGKQGGRGGA
GSPGRNGETGQRGVRGSEGDPGVMGAMGITGMTGGRGGRGSRGVKGDGGASGLRGPPGIT
GSRGSEGRPGSSGVAGAPGSLGAKGDDGFPGEDGAPGFPGKSGGVGLVGMKGVEGIVGND
GSQGERGSTGPKGESGAPGGQGAAGAPGTMGLQGPAGSQGSTGDVGDEGAPGSAGDAGSA
GFSGRQGPKGSSGSNGVSGKRGRAGEPGLNGVNGDPGLQGLAGLPGDEGGMGEPVCNAFI
RELLQSSDVEFQFFFQFTTNL
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgcttcgtataactttccttcgcgtcctgctgctcggtttgtttgggatttcagcgaca
acagcacagcgattggatgacccatgtattcttgacctggcattcatcatagacgcatct
ggtagcatcgagccttattgggaagatgttcggaagtttgccgccggagtcgcgaaactg
gtgaacatatcgtccgatggatcccatgttggagcggttaagttcggcgagacatccaaa
atagaatttgggttcaatgaagggcaaaacgaaaacactgttgttcgaaatttgcttaat
ctagatccccctgttccgggttcaagaaccatgctgcactcagcgctcgaaaaagcaaac
gacgaccttttcaacccacagacaaatagcttccgagaagatcccaatgtacggaaggtt
gttttaattataactgatggtgcgcaaacccctccagaaaaacctgacataccagctgac
aaactgaaaaaaaggggttttgagatttacgccatcggtgccggagatgccaaatcacat
tacagggaattggatatgttaagaaacaaagatttgttctttgtcaaaaggccgagtgaa
cttccaacgaaagttgtcgatgtggcacaagcactctgtccgaggtcgattgaaaccacg
gttattggtcccccaggagagagaggagcattcggccttcggggtgacgtcggggcacca
ggccgtcgcggaagaacagggccagccggattaaagggtttctcaggggtcaaaggtgca
atgggcgaccttggagatccggggaatccaggccctcccggccccccaggatcgacggcc
gggctaccgagtgtacctggcgaaaaaggtccattagttctagttaatgtggtacctgac
attccgggcgggaggatcgggcagccaggaggctctggggatacagggccaaagggatat
gagggggcgttcggttttgccggaataacaggaagtcccggagatgatggacgtcaggga
tttcaaggccccttaggtccttttggggagcctggcccggatggtccagatggacctgcg
ggcccaaagggaagacccggacctgaaggatatagaggacgaaggggaccaatgggtgat
cctggaccattaggcaatcctggtcctgttggatctaagggccgagaaggacgaactgga
atcgctggacagcagggacaggatggtgaactgggtgataccggtgacgttggcaaacca
ggacctgacggatcagtgggtatgaatggattaagcggagtgagcggacggcccggttac
ccaggcccttcaggtttcgagggaaaagaaggacctgctggtgcacctggaactcagggc
tttaaaggaggtcccggcagcccaggagcgccgggtgatccaggaatcaaaggaagccca
ggacagggaggtgacacaggcctcatgggcgataccggacccacaggtgaaagcggatct
ggtggactgccgggaactgacggagtgacgggttctcgcgggtcggttggtaaacaaggg
gaatttggaggcccgggcgatcctggaccagcaggacctacgggaggagagggacgttca
ggagaaaccggcataccaggggatcttggatcaacaggcggcaaaggagcaaagggtgag
ctcggaagaccaggaagcacgggatccactggtgataaaggaccagcgggtcttgcggga
ccaaatggtgcccgaggatttcaaggttcgcccggtaaacagggtggccgtggcggagcg
ggcagtcccggaagaaatggcgaaaccggacaaagaggagtgcggggtagtgaaggagat
ccgggtgttatgggtgcaatgggaataacgggaatgactggaggacgtgggggacgagga
tccagaggtgttaagggagatgggggtgcttcaggcttacgcggtccaccaggaataacc
ggatcaagaggttctgagggcagaccaggatctagtggagttgcaggcgcaccaggaagt
ttgggcgctaaaggcgatgatggttttccaggagaggacggtgcaccgggttttcctggt
aaatctggaggcgttggacttgttggtatgaaaggagttgagggaattgttggaaatgat
ggaagtcaaggggaacgaggatcaactggaccaaagggtgaatcaggtgccccaggaggt
caaggtgcggcaggggcaccaggaaccatgggtctccaaggtcctgcagggtcccaggga
tcaactggggacgttggtgatgagggagctcctggttctgccggtgatgcgggctcagca
ggattcagtggccgccaggggcccaaaggaagctcaggttctaatggagtttctgggaaa
agaggaagagctggtgaacctggccttaacggagtaaatggagatccgggcttgcaagga
ttagctggacttccgggagacgaaggaggcatgggagaacctgtatgtaacgcttttata
cgtgagctcttgcaatcctcggatgttgagtttcaatttttctttcagtttaccacaaat
ttgtga

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