KEGG   Pocillopora damicornis (lace coral): 113685752
Entry
113685752         CDS       T05773                                 
Name
(RefSeq) collagen alpha-1(I) chain-like
  KO
K19719  collagen type II alpha
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam04512  ECM-receptor interaction
pdam04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113685752
   04518 Integrin signaling
    113685752
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:pdam00536]
    113685752
Glycosaminoglycan binding proteins [BR:pdam00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113685752
SSDB
Motif
Pfam: COLFI Collagen Fibrinogen_C
Other DBs
NCBI-GeneID: 113685752
NCBI-ProteinID: XP_027059098
LinkDB
Position
Unknown
AA seq 713 aa
MGQQGAEGEPGEAGETGIRGPNGVSGDRGLAGTPGQSGADGPQGDPGAPGASGFEGKMGM
IGSIGDQGPTGLKGFRGQEGAAGLHGISGNTGSQGAQGVIGQKGYRGEEGDSGGPGGPGA
TGMMGEPGPAGGAGDQGSSGKTGRNGNKGAVGDPGPPGDNGGRGSPGAQGQPGPPGPPGT
AGSIGDFGLDGAAGYSGPVGMRGNVGPIGKAGIQGAAGAKGEIGEQGKEGIDGKAGIDGE
VGAAGSPGKSGERGSTGSPGESGKAGKPGRVGSKGLDGDLGAAGSQGDVGPTGPEGPKGE
EGATGTEGTVGVPGQRGSRGSDGNPGATGDPGESGDDGNVGSRGQKGDAGDTGDTGPDGS
LGPKGQKGSIGPRGDSGLEGAVGADGPRGRVGERGDEGFEGPTGMSGSVGLKGDRGRQGE
DGQEGPAGGRGPPGSPAVLPAEFAGQFSFPGYQQDYSDPASLQTEKSGSRRLYRSGEQDT
ETETKPQIDLYDVISYRIDMYKNPNGSQAFPARTCRDLHMSYPELKSGLYWIDPNGGIAN
DAIEVYCEFQTNGSCLYPGQENQPFVTDKKKWFSGSDGYKWLGKELLGLDKLEYVSEQSQ
LEFLQLLSDRARQRITYHCKNSVAWPEKSSNEGIKSIKMLTVNGLELHARSSNKFKPTLV
GDDCALKDGSWHRTTLEVDTPKPHRLPVLDVAVYDIGDSGEEFGLEFGRVCFS
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgggacaacagggcgctgagggtgaacctggcgaagcaggagaaactggaattcgagga
cctaatggtgtctctggcgatcgtggtctcgctggcactccgggacaaagtggagcagat
ggtccacaaggggacccgggagcccctggtgcgtctggctttgaagggaaaatgggcatg
attggttccattggagatcaagggccaacaggtcttaaaggatttaggggtcaagaagga
gccgccggtttacatgggatcagtggaaatacaggttctcagggagctcaaggagtcatt
ggtcaaaagggatatcgtggagaggaaggcgacagcggaggaccaggaggacccggggca
acgggaatgatgggagaacctggaccagcgggaggagctggtgatcaaggaagtagtgga
aaaactggtcgcaatggaaacaagggtgctgttggtgatcctggtcccccaggggacaac
ggaggcaggggctcaccgggagcccagggccagcctggacctcctggtccacccggaact
gctgggtcaattggtgattttggcttagatggagctgcgggctactcagggccagttgga
atgaggggcaatgttggaccgattggtaaggcaggaatccaaggtgcagcgggagcaaag
ggagaaataggagaacaaggaaaggaaggaatagacggaaaagctggcatagatggtgag
gtaggagcagctggctctccagggaagtctggcgaacgcggttccactggaagtcctggt
gaatctggtaaagcaggaaaacctggaagagttggatctaagggccttgacggcgacttg
ggagcagctggatcacagggagatgttggtccaactggaccggagggtccaaaaggcgaa
gaaggagccactggaaccgaaggcactgtgggtgttccaggtcagcgtggctcgcgagga
tctgacggcaaccctggtgccacgggcgatcctggagaatcaggtgatgatggaaacgtc
ggttcaagaggacaaaagggagacgcgggtgatacgggtgacactggcccagacgggagc
ctgggaccaaagggtcaaaaaggctccattggtccacgaggagatagtgggttagaagga
gctgtgggtgctgatgggccacgtggtcgggtcggtgaaagaggggacgaaggttttgag
ggaccaacaggaatgtctggatccgtaggattgaagggagatcgtggtcgccagggcgaa
gacggtcaagagggtcccgcaggtggaagaggacctcctggttcaccagccgttcttcca
gctgagtttgcgggacagttttcattcccaggttaccaacaagattacagcgatcctgcc
tctctccaaacagaaaaatctggttctaggaggttgtaccgaagcggcgaacaggacact
gagaccgaaaccaagcctcagattgacctttacgacgtgatcagttatcgtatagacatg
tataagaatcccaacggctcccaagcattccccgcaaggacctgtcgagacttgcacatg
agctatcctgaacttaaaagcggactctattggattgatcctaatggtgggatagcaaac
gatgccatcgaagtttattgtgaattccaaaccaacgggtcctgcctgtatccgggacaa
gaaaaccagccgtttgtaactgacaagaagaaatggttcagcggtagcgatggatacaaa
tggctaggcaaagaactgctcggacttgacaagcttgaatacgtgtcggagcaaagtcag
ctggagttcctccagctgttaagtgatcgtgcccgccagcggattacgtatcactgcaag
aactcagtagcatggcctgagaagagttcgaatgaagggataaagtccatcaagatgcta
actgttaatgggcttgaactgcacgcgagatcctcaaacaaatttaaaccgacactagtg
ggggatgactgtgcgttgaaagacggatcttggcatcgtaccacattggaagtggacaca
cccaaacctcaccgtctccccgttcttgatgtagctgtatatgatattggagatagtgga
gaggaatttggtctagaattcggacgcgtttgcttctcttga

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