Pocillopora damicornis (lace coral): 113685752
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Entry
113685752 CDS
T05773
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19719
collagen type II alpha
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04512
ECM-receptor interaction
pdam04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113685752
04518 Integrin signaling
113685752
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pdam00536
]
113685752
Glycosaminoglycan binding proteins [BR:
pdam00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113685752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COLFI
Collagen
Fibrinogen_C
Motif
Other DBs
NCBI-GeneID:
113685752
NCBI-ProteinID:
XP_027059098
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MGQQGAEGEPGEAGETGIRGPNGVSGDRGLAGTPGQSGADGPQGDPGAPGASGFEGKMGM
IGSIGDQGPTGLKGFRGQEGAAGLHGISGNTGSQGAQGVIGQKGYRGEEGDSGGPGGPGA
TGMMGEPGPAGGAGDQGSSGKTGRNGNKGAVGDPGPPGDNGGRGSPGAQGQPGPPGPPGT
AGSIGDFGLDGAAGYSGPVGMRGNVGPIGKAGIQGAAGAKGEIGEQGKEGIDGKAGIDGE
VGAAGSPGKSGERGSTGSPGESGKAGKPGRVGSKGLDGDLGAAGSQGDVGPTGPEGPKGE
EGATGTEGTVGVPGQRGSRGSDGNPGATGDPGESGDDGNVGSRGQKGDAGDTGDTGPDGS
LGPKGQKGSIGPRGDSGLEGAVGADGPRGRVGERGDEGFEGPTGMSGSVGLKGDRGRQGE
DGQEGPAGGRGPPGSPAVLPAEFAGQFSFPGYQQDYSDPASLQTEKSGSRRLYRSGEQDT
ETETKPQIDLYDVISYRIDMYKNPNGSQAFPARTCRDLHMSYPELKSGLYWIDPNGGIAN
DAIEVYCEFQTNGSCLYPGQENQPFVTDKKKWFSGSDGYKWLGKELLGLDKLEYVSEQSQ
LEFLQLLSDRARQRITYHCKNSVAWPEKSSNEGIKSIKMLTVNGLELHARSSNKFKPTLV
GDDCALKDGSWHRTTLEVDTPKPHRLPVLDVAVYDIGDSGEEFGLEFGRVCFS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgggacaacagggcgctgagggtgaacctggcgaagcaggagaaactggaattcgagga
cctaatggtgtctctggcgatcgtggtctcgctggcactccgggacaaagtggagcagat
ggtccacaaggggacccgggagcccctggtgcgtctggctttgaagggaaaatgggcatg
attggttccattggagatcaagggccaacaggtcttaaaggatttaggggtcaagaagga
gccgccggtttacatgggatcagtggaaatacaggttctcagggagctcaaggagtcatt
ggtcaaaagggatatcgtggagaggaaggcgacagcggaggaccaggaggacccggggca
acgggaatgatgggagaacctggaccagcgggaggagctggtgatcaaggaagtagtgga
aaaactggtcgcaatggaaacaagggtgctgttggtgatcctggtcccccaggggacaac
ggaggcaggggctcaccgggagcccagggccagcctggacctcctggtccacccggaact
gctgggtcaattggtgattttggcttagatggagctgcgggctactcagggccagttgga
atgaggggcaatgttggaccgattggtaaggcaggaatccaaggtgcagcgggagcaaag
ggagaaataggagaacaaggaaaggaaggaatagacggaaaagctggcatagatggtgag
gtaggagcagctggctctccagggaagtctggcgaacgcggttccactggaagtcctggt
gaatctggtaaagcaggaaaacctggaagagttggatctaagggccttgacggcgacttg
ggagcagctggatcacagggagatgttggtccaactggaccggagggtccaaaaggcgaa
gaaggagccactggaaccgaaggcactgtgggtgttccaggtcagcgtggctcgcgagga
tctgacggcaaccctggtgccacgggcgatcctggagaatcaggtgatgatggaaacgtc
ggttcaagaggacaaaagggagacgcgggtgatacgggtgacactggcccagacgggagc
ctgggaccaaagggtcaaaaaggctccattggtccacgaggagatagtgggttagaagga
gctgtgggtgctgatgggccacgtggtcgggtcggtgaaagaggggacgaaggttttgag
ggaccaacaggaatgtctggatccgtaggattgaagggagatcgtggtcgccagggcgaa
gacggtcaagagggtcccgcaggtggaagaggacctcctggttcaccagccgttcttcca
gctgagtttgcgggacagttttcattcccaggttaccaacaagattacagcgatcctgcc
tctctccaaacagaaaaatctggttctaggaggttgtaccgaagcggcgaacaggacact
gagaccgaaaccaagcctcagattgacctttacgacgtgatcagttatcgtatagacatg
tataagaatcccaacggctcccaagcattccccgcaaggacctgtcgagacttgcacatg
agctatcctgaacttaaaagcggactctattggattgatcctaatggtgggatagcaaac
gatgccatcgaagtttattgtgaattccaaaccaacgggtcctgcctgtatccgggacaa
gaaaaccagccgtttgtaactgacaagaagaaatggttcagcggtagcgatggatacaaa
tggctaggcaaagaactgctcggacttgacaagcttgaatacgtgtcggagcaaagtcag
ctggagttcctccagctgttaagtgatcgtgcccgccagcggattacgtatcactgcaag
aactcagtagcatggcctgagaagagttcgaatgaagggataaagtccatcaagatgcta
actgttaatgggcttgaactgcacgcgagatcctcaaacaaatttaaaccgacactagtg
ggggatgactgtgcgttgaaagacggatcttggcatcgtaccacattggaagtggacaca
cccaaacctcaccgtctccccgttcttgatgtagctgtatatgatattggagatagtgga
gaggaatttggtctagaattcggacgcgtttgcttctcttga
DBGET
integrated database retrieval system