Pocillopora damicornis (lace coral): 113686267
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Entry
113686267 CDS
T05773
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113686267
03041 Spliceosome [BR:
pdam03041
]
113686267
03036 Chromosome and associated proteins [BR:
pdam03036
]
113686267
Enzymes [BR:
pdam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113686267
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113686267
mRNA cycle factors
Common to processing body (P body) and stress granule
113686267
Spliceosome [BR:
pdam03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113686267
Chromosome and associated proteins [BR:
pdam03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113686267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
113686267
NCBI-ProteinID:
XP_027059671
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MSHVAPANFQALDQRFAGLDLNQGAVNPHGVDPKSQQERYVPPHLRSRPGPPPPHGRGGY
HDHGYNQQRDFQHREPYRDGFYQQQPNFYGGYPPRGGGRPYYGGGQYYGGGRGGGNSWRD
RGDNRGPPPTRGSGNDYNRVTQPPPEDWSKLLPKNDRIERELFNKHNTGINFDKYEDIPV
EATGQDVPKNIESFSDCELGEILCNNVELANYSKPTPVQKYAIPIVKKKRDLMACAQTGS
GKTAAFLIPILSRIFEEGPPPLPDARHQGRRKQFPHCLVLAPTRELACQIFEESRKFSYR
SYVRPCVVYGGADIGGQLKELDRGCHLLVATPGRLVDMLDRGRVGLDSCKFLVLDEADRM
LDMGFEPQIRRIVDQDTMPKAGERQTLMFSATFPKEIQMLARDFLVNYIFLAVGRVGSTS
ENITQKTVWVDEYDKRSFLLDLLNASGPKSLTLVFVETKKGADALDDFLHGEGWYATSIH
GDRSQREREAALGSFKSGRTPILVATAVAARGLDIPNVRHVINFDMPTDIEEYVHRIGRT
GRVGHTGLATSFFNEKNRNVAKDLVELLSESRQEVPSWLESIAFESHQNSGRSRGRSRHS
AGGFGSRDYRQQPHHRGGGGGGAHYGYGGGAGGYWNPGRYSGGNASQDWWN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccccagctaactttcaagctctagaccagcggttcgctggtctggac
ttgaatcagggcgccgttaaccctcacggcgtcgatcctaagtctcaacaagaacgatac
gtgcctcctcaccttcgcagcagacctggtcctcctcctcctcatggcagaggggggtac
catgatcatggatacaaccagcaaagggactttcaacacagggaaccctacagagatgga
ttttaccaacagcagccaaacttttatggtggatatcctccacgaggaggtggacgccca
tactatgggggaggtcagtattatggtggaggccgtggaggaggaaacagctggagagat
aggggtgacaaccgaggacctcctcccacaagaggaagtggcaatgactataacagagtc
actcagccaccaccagaagattggtctaaacttttgccgaagaatgaccgcattgaaagg
gagcttttcaacaagcacaacactggaataaattttgacaagtatgaagatattcctgtg
gaagccactggacaggatgtccctaaaaacattgagtcgttttctgactgtgaactaggg
gaaatcttgtgcaacaatgttgagctggccaattactccaagcccactccagttcaaaag
tatgcgatacctattgtgaagaagaagagggacttgatggcatgtgcccagactggttct
gggaagactgctgccttcctgattcccattctcagcaggatttttgaggaaggtcctcct
cccctacctgatgctcggcatcagggtcgccgaaagcagttccctcactgcctggttcta
gcaccaaccagggaattggcttgtcaaatctttgaggaatccaggaagttttcttacagg
tcatatgtgcgtccctgtgtggtttatggtggagctgacattggtggccaactgaaggag
ctggatcgtggctgccatcttcttgtggccacacctggtcgtctcgttgacatgttggac
aggggacgagtggggctggactcttgcaagttccttgttctggatgaggctgatcgtatg
ttggacatgggatttgagcctcaaatccgacgcattgttgatcaggacaccatgcctaaa
gctggtgaacgacagacacttatgttcagtgccactttccctaaggaaatccagatgctg
gctagagatttcctggtgaattacatcttcttggctgtgggacgtgtgggctccacaagt
gagaacatcacacaaaaaacagtgtgggttgatgaatacgacaagaggtcattcttattg
gatctgctgaatgcttcaggtccaaagtctctgacattggtatttgtggaaaccaaaaaa
ggagctgatgctttggatgattttctgcacggtgaaggctggtatgcaacctccattcat
ggtgatcgctctcagcgggagcgagaggcagctttggggtcatttaagtctggccgcaca
ccaatcttggtagctacagctgttgctgctcgtggcttggatattccaaatgtgcgccat
gtgatcaactttgacatgccaactgatatagaggagtatgtccatcgcattggacgcaca
ggccgtgtgggacacactggcttagctacttcatttttcaatgagaagaatcggaatgtg
gccaaggatttggttgagctgttgagtgaaagcaggcaagaggtgccaagctggctggag
tctattgcctttgagagccatcagaattcaggcaggagccgtggaaggagcaggcactca
gctggtggctttgggtcccgtgactacaggcagcagccacatcaccgtggaggtgggggt
ggtggagcccactatggttatgggggaggagcagggggctactggaatccaggccgttat
tctggtggcaatgcttcccaggattggtggaactag
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