Pocillopora damicornis (lace coral): 113686825
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Entry
113686825 CDS
T05773
Name
(RefSeq) transcription factor Sox-21-B-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdam03000
]
113686825
Transcription factors [BR:
pdam03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113686825
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113686825
NCBI-ProteinID:
XP_027060303
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MSPLNHVIKKLIFNSLVTSITRVLAYQRHHSSRELGRRIFLKSEENSSALTSPRPYNSTE
REEMHGDDRMLLSDRRTVRNKRIPAPLPQILNPLGFDNPIGVCHPQLPRHSQNYAKLLGS
MDQGAVAKKDPAMENDSDRIKRPMNAFMVWAQVERRRLADANPELHNAELSKILGQAWRS
LNGSQKRPYVEEAERLRQQHIKDHPDYKYRPRRRKHPKRVCKKMTSSTPPNCAVIRNPKE
TTAHVSHSTSGAECGQLAVNPAEENLMNFGQSSAPIPFANGDLRLTHLGGHSTLPNLSEI
SLPTPETSPGSDEFGSEFNFPTCWQDLQSAPTSVQIKSHSTSPPPYVGVSTSNSAPVSPI
YLTNGGLQVPNSVPMMPGSANTQLQPNDTSANQIFYFAQHIRELLPEGDFNREEFDQYLD
GTETANIMCDVAW
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctctcaaccacgtgataaaaaagcttattttcaactcgcttgtcacatctatc
acacgtgttcttgcatatcagagacatcatagcagcagggagcttggcaggcgaattttt
ttgaagtcagaagaaaattcttccgcgctaacctcgccacgaccgtataacagcacagaa
cgcgaagaaatgcatggcgacgacagaatgctgctctccgatcgaagaacggtacgaaat
aagagaatcccggcacctctaccacaaattttaaaccccttggggtttgacaatccgatc
ggtgtatgtcaccctcaactgccgcggcatagccagaattatgcaaaattgctggggtcg
atggaccaaggagctgtcgcgaagaaagacccagctatggagaacgactccgacagaatc
aagcgtcctatgaacgctttcatggtttgggcacaagtggagagaagacgactggcggat
gcaaacccagagctgcacaatgccgagctcagtaaaattctgggacaagcttggagatcg
ctgaacgggtcgcagaaacgaccttatgtagaagaggccgagcgtttgcggcaacagcat
attaaggatcaccctgactacaaatatcggcccaggcgaagaaaacaccccaaaagagtt
tgtaagaaaatgacttcttctacacccccgaactgcgcagtaatacgcaatccgaaagaa
acaacagcccatgtctcgcactctacttcaggtgccgagtgcggacaactcgcggtcaac
cctgcagaggaaaatttaatgaactttggtcagtcatctgcaccaattccgtttgcaaac
ggagatttaaggctgacacatctcggcggccattccaccttgccaaatttgtccgagata
agccttcccacaccagagacgagtcccggatctgacgaatttggtagtgagtttaacttc
ccaacttgctggcaagaccttcaaagtgcgcccactagtgtgcagataaaatcacattcc
acctccccaccgccatatgtcggtgtatctacttcaaattcagcgcctgtgagcccgatc
tatctcacaaacggaggcctacaggtaccgaattctgtgccgatgatgcctggtagcgcg
aacactcaacttcaacccaatgacaccagtgcaaatcagatcttctacttcgctcaacat
atcagggagctgttacccgaaggagacttcaacagggaggaattcgatcagtacctagac
ggcacagaaacagcaaatattatgtgtgatgtggcctggtga
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