Pocillopora damicornis (lace coral): 113686885 Help Entry 113686885         CDS       T05773                                  Name (RefSeq) usherin-like   KO K19636   usherin Organism pdam  Pocillopora damicornis (lace coral) Brite KEGG Orthology (KO) [BR:pdam00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:pdam03037]     113686885 Cilium and associated proteins [BR:pdam03037]  Primary cilia and associated proteins   USH complex and associated proteins    113686885 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  fn3 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C fn3_2 Galaxin_repeat ChitinaseA_N Orthoreo_P10 DUF2606 Motif Other DBs NCBI-GeneID:  113686885 NCBI-ProteinID:  XP_027060367 LinkDB All DBs Position Unknown AA seq 2929 aa AA seqDB search MLPPEKPNGVILNYELYQDGVSERVLNESQLTNYTAVRLKPYSLHTFRVRACTAQGCAYG KKAEAYTKEIAPNGTLTLTARVRNATAVDANWTRVALPNGKLFYNLMVYGKFVIFDSGDL RTEDRIETAISVEEAEKLFTYNGLLPFSDYRLWVNASNSVGFILSNNVTVSTPEGVPGGL KAPNVTVLNSTAVHVTWEQPALPNGIVLGYGLHQKTDGSETLRFSGMGFNFTVTGLDPFT DYRFRVNASTVAGSGFSEWTLVKTSEDVPSSPDAPDFRNVTSASVTLVWDEPAEPNGVLL YYVIYQNGTEIKRVTGNVTKYVAVGLQPFTVYVFKLSVCTAVGCSNSSDSVPMRTLESGP QGLSAPRLSSLSGRTVVIEWNPPSVPNGVILKYVIQRRVVGGGNPSDVAEVNASLPLHYE DNTAQPVTNYQYRVIAYNSGPGEPSPYGNITTGEGDPEGIAAPTVVALSPYAIHVTWKKP SIPNGVVTQYVIRVVDQQQSRNTTVNANEPFALNVTSLDPYIMYNVFVSACTVAACGSSP PSQVRTLPAKPEMQPAPTAKTDSQTSLNVTWEPPLRPNGVIRSYVLYRRTVEDLVENNIS APTDYVQVYEGPALIREYRDTGLGIFSLQQYKVTVNTSQGSTTSNSSLPYRTGPAPPLAG VFVNGTALNHTSVLVTWYPPVIKQLRGSAVSYTLDVEERSVVSRVGTYPGTQTRVTVNNL KANTVYTFYVELNNGAGTFKSAGFGIRTLDGMPEDFDPPALYVVSSTAIRVSWNETGNPN GVVILYKIYVNNTLWANTTGDQLQVIVSGLQPFTFYSIKVAVCTTHGCTLSDARQARTNA AAPTGFAAPRLTAGSTFIVVQWEPPSRPNGIMSGYQIFRRMVYSCPTSPPPISKCTFIEC LLSEQLCGVTCYNPANQVCCSGVLHPRDPSKTCCSANYLRKNQASDVCCGNTFHIQQAGY QCCYGNYISVASGRVCCPKSQGGSVVGLGNACCGDTPYNKNDPTKVCVCGALYDPIPPRK CCGGKVVASAQVCCGDEKNGAAYDLEASKTCCGAQYISEDTSLCCQGSAGDVVVYNYTSA RDKSTSNHKCCGKKRISSFLTCCNERGYNSTYQTCADISSNGTLGCGMGTICNKTDALAA MCDRCDFDNSTMNCGFVAGHYAPTPSTVVPRICATDYEEILKNQYNADIREYNDTGLSPH TEYEYYLVAINNGFNVSSPEAKNRTLMGRPEGLLPPVAVPISSTEIRVTWSKPAKPNGEI QEYRLTRVSGQIKLRQVVYTGLNLTYTDRGLEPFTGYGYVIEACTTHCSSAEMTSLIYTD QAAPAEVNAAILLPLNFSAINVSWIEPSKPNGQIIRYNVSRVVNSTYKIHLNPNDKGLSV RSLVIGGLKPYTNYTFEVIACTRVGCTPGPLASTLTLQAPPEGVHPPNLTVIGAREIEAT WIGPDVLNGVIVSYSLYRGDLVVYNGTNACYKNQHGKDICIFQDRGNGLQPVTTYNYSVA ASTGGGTTRSAVSTATTPESSPEAIPKPRLTVKSAYSILAEWNAPGQPNGNITSYSAVVN GTEYVVALNMSKLIPGLNPFTIYSVRLKACTAKGCGLGEREHARTGEAPPIGQGAPTLVA REWNVVQVSWSRPSFPNGIVVQYVVYRKTGNSAPLPVCFTLQRSCLNSGLLGYTDYSYRI RVVNSAGFEEGPWTDVRTPQGPPQGIRPPSLTVLNSTAVYLSWTVPSQPNGIVTHYEVRY HKGLQTPDNSNVTVAARLPSNVLNATVSGLDPYTDYQFLIAAINSRREGVSAWATAKTKQ APPADLPLLRADKTKDGKSMRMLWDEPGSPNGVITHYKLYKDSVLIYRGSIREYTVSRLV PYTAYEFQLEACNVAGCTRGPTQIIFSAEVDPQGLSRPTTGFINATAVELNWRSPAIPNG IIIRYEIYMTVTPLQKRRRRAVTPPSGQLVYSTNDTNKTDFKHTETGLKPYTKYGFSVRA VNGGGFTESDPLIVTTSQAAPSSVDAPLVLLMTVYSLNVTWKKPLEPNGVVQFYFVFRNN SIKYKGNELSFVDQGLEPYTVYSYTVEVCTSCNVDCCTQSSPSSRRTTQAAPSGVYPPAL EAESALAIKISWVTPDKPNGIITQYQVYEVGDSSPIYTGQDMTLTVSGKAPFSKYSFYIS ACTSEGCTQSAPAEVRTKEAPPRDLLAPVATVGGSSFVRVEWNAPLKPYGVILHYLLTRN GSQVYNGTDLKFNDLTVAPHTVYMYVVTAVNSAGRVSSPPGFSAATNPGAPDNVSIPTLY VLSATSIKVLWTAPGVPNGVIFKYEVLYNFMGAQGVAQVNDAGIAKEITLKDLLPYTLYE VRIRACTLKGCSIGEANYARTFEAPPEGQNPPDFPTSNIGARRVLVTWNEPLKPNGFMLS YRLYRRGVSLYGNQATVYGPAESVVNVTNGSALAYSDTNVKPYFKYNYRVISANSAGETV SQWSLVQTLSAAPEQLKAPHVNKTYPYSLEVFIFPPGEPNGEIRNYILEVSGRNVSQELT TTREVAGLEPFTDYVLRVYVCTDGGCAAGPTATWKTSVGVPSEFAAPRPIEITNNFVTLI WDEPGKPNGVIQRYEVLFHETCAVGCPTAMPESGLNTSLSRRYTVRSLSPYTMYNFRIRV HNSRHSSLSDEQRVRTLAAGPQTTELRPRVNVSGLRVAVDWSDCFILNGPLDSYELLENG LLVYEGQQNKMDLGNRNKGEYTYKVHATTLVQGSKMTVESPPSVPVQVQSEVIAATSAPR TASDEWQKSVWFIAVMALVAIIILFALIFCCMRKSTGSRTVFVRNREPLPPRTKLRSRPP SMSSLYTSSDRKSGSMTEMHLMNPYHSSTTALFDSTERLNKTPEQFDFYNGSMHKVPPDM SQDWDHYVKSYSNRDSGLYDDEKLDFSDSEPSTPYQSFKREQYFTDTHL NT seq 8790 nt NT seq  +upstreamnt  +downstreamnt atgttgccaccggaaaaaccgaacggtgtcatcttaaactatgaactgtaccaagatgga gtttcagagcgtgtgttgaatgaatcacagcttacgaattacacagcggttcgattaaaa ccatacagccttcatactttccgcgttcgagcttgcactgcacaagggtgcgcttatgga aaaaaagctgaggcttatacgaaagaaatcgcaccgaatggaactcttactcttactgct cgtgtgcgcaatgcgacagcggttgacgctaactggacacgcgtggctttaccgaacgga aagttgttttataacttaatggtgtatggaaaatttgtcatcttcgactcgggtgacttg agaactgaggatcgtattgaaactgctatttctgtcgaggaagctgaaaaactgttcaca tacaatggccttctaccattcagtgattacaggctctgggtgaatgcgtcgaattctgtt gggtttattctcagtaacaacgtcaccgtgtccacccctgaaggagttcccggcggtctg aaagcccccaatgtcactgtgttgaattcgactgctgtccatgtcacgtgggaacaacct gcattgcctaatgggattgttcttggctatggacttcatcagaaaactgacggctctgaa acacttcggttcagtggaatgggttttaattttactgtcactggcttggacccgtttacg gactaccgattccgtgtaaatgccagcactgtagcggggtctgggtttagtgagtggact ctggtcaagacctctgaggatgtcccaagttccccggatgcaccagattttagaaatgtg acttccgcatctgtgacactggtctgggacgagccagctgaacccaatggagtgctcctt tattacgtcatttatcagaatggcactgagatcaagagagtcacgggaaatgtcaccaaa tatgtagctgttggtctccagcccttcactgtctacgtgttcaagctgagtgtgtgtaca gcggtaggctgcagtaacagctcggactcagtccccatgagaactctggagtcaggtcca caaggtttgtcagctccaaggctgtcatctctatcagggagaactgtggttattgaatgg aacccaccctccgtgcctaatggcgtcattctcaaatatgtgattcagcggcgagtcgtg ggtggtggaaatccaagcgatgtcgctgaagtgaatgcctctcttccactgcattacgag gataatacagcacagccagtgaccaattatcagtaccgcgtgatagcgtataacagtggt ccgggagaacccagtccatatggtaacattactacaggcgagggagaccctgaaggcatc gcagcaccaactgttgtagcactcagtccatacgccattcacgtgacttggaaaaaaccc agcattcccaatggcgtagtgacgcaatacgtcatcagagtcgtggaccaacagcagtca cgcaacaccacagtgaatgctaatgaaccgtttgcgctaaacgtgacctcactcgatcct tacatcatgtacaacgtcttcgttagcgcatgcacagttgctgcatgtggtagcagcccg ccgtctcaagtgcgcacgcttcctgccaaacctgaaatgcagccagcgccaactgcaaag acagattcacagacctctttgaacgtgacatgggagcctcccctcaggccaaacggggtg attcgttcttatgtgctgtacaggagaactgttgaagaccttgtggaaaataacatttca gcaccaacagattatgtacaggtgtatgaggggccggctttgatccgagagtatcgtgat actggacttgggatcttctctttgcaacagtacaaggtcactgtgaatactagtcaaggc agcactacaagcaactcctccctaccctacagaaccggccctgcccctcccctagcaggg gtattcgtcaatggaactgccctaaatcacacctcagttctggtcacgtggtacccacct gttattaagcagttacgtggctctgctgtgtcgtatactttagacgttgaagaaagatct gtcgtgagtcgcgtgggcacttaccccggaacacagactcgtgtaacagttaataatctg aaggccaacactgtgtacacattttatgttgaactaaacaatggagcaggaaccttcaag agtgctggctttggaatcagaaccttggatggaatgcctgaagatttcgatccgcctgca ctatacgtggtcagcagcactgcaattcgcgtgagttggaatgagacaggaaacccgaat ggagttgtaatattgtacaaaatatatgtaaacaacacgttatgggctaacactactggc gatcaactacaagtaatcgtgtctggactgcagccgtttaccttctatagcatcaaggtg gcagtgtgcactacacacggttgtactctcagtgatgcaagacaggcgcggacaaatgct gcagcaccgacaggttttgctgctccgcgactcactgcaggatcaacttttattgttgtc caatgggagccaccatctcgtccaaacggaatcatgtctggttatcagatttttagaaga atggtgtactcatgtccaacgagtcccccgccaatctctaaatgcactttcattgagtgt ctcttgtcagagcagttatgtggagtcacgtgttacaatccagccaatcaggtgtgttgc agtggtgttcttcacccacgtgacccatccaagacttgttgtagcgcgaattatctgcgt aagaaccaggcctctgatgtttgttgcggtaacactttccatattcaacaagccggctat caatgttgctatggcaactacatcagtgttgcttcgggacgagtctgctgtcctaaatct cagggaggtagtgtggtgggtcttggtaatgcctgttgtggagacaccccgtataacaag aacgaccccactaaggtttgcgtgtgtggagcgctgtacgaccccattcccccacgaaag tgttgtggcggcaaagttgtggcgtctgctcaggtttgctgcggcgatgaaaagaacgga gccgcctacgatctggaagctagcaagacttgctgtggagctcaatacatttctgaagac acgagcctttgttgtcaaggatcagcgggagatgtcgtggtttataactacaccagcgca cgcgataaatctacatccaatcacaaatgctgtggtaaaaaacgaatttctagttttctc acatgttgcaacgaacgtggctataactctacttaccagacttgcgcagatatttccagc aacggaacgttaggctgtggaatgggaacaatttgtaataagactgatgcactcgcagca atgtgtgatcgatgtgattttgataattcaacgatgaactgcggatttgttgctggccac tacgctccaactccttcgactgttgtaccaagaatctgtgccacggattacgaagaaata cttaaaaatcaatacaatgctgatatccgtgaatataacgacactgggctctctcctcat acagaatatgaatactaccttgtcgcaatcaataatggatttaatgtgtcaagtccagaa gccaagaaccgaacactgatgggtcgccctgaaggtcttttaccgccagttgcagttcca atttcctcgactgaaatccgcgttacttggagtaagccagcaaaacccaacggagaaatc caagagtataggctgacccgggtcagcggtcaaattaagctgcgtcaagtggtatatacc ggtcttaatttaacttatacagaccgtggattggagccgtttactggatatggttacgtt atcgaggcatgcacgacgcactgctcatcagcggaaatgacgtcactgatctacaccgac caagctgccccggcggaagtgaacgcagccattttacttccgttaaacttcagcgctata aatgtttcttggattgaaccttccaaacctaacggacagattattcgttacaatgtgagc cgtgtagtaaacagcacgtacaagatccatttgaacccgaatgacaaaggtttgtccgta aggagcctggtaattgggggtcttaaaccctatactaactatacctttgaagtgatagct tgtacgcgcgtgggttgcacaccaggtccgctggcctccacgctaacactgcaggcgccg cctgaaggtgtccacccacccaatctcacagtcatcggggccagggaaatcgaagccaca tggattggaccagacgttctaaatggtgtgattgtttcatactcactctaccgcggagat cttgttgtgtacaacgggacgaatgcatgttacaaaaatcaacacggtaaagacatttgt atcttccaagaccgaggcaacggtctccaaccagtgacgacttacaattactcagtcgct gcttcgactggcgggggtaccactaggagtgctgtgtctactgccactaccccagagagt tctccagaggccattcccaagcctcgtttgactgtgaaaagcgcttatagtattttagcg gaatggaatgctccaggtcagccaaacggtaacattacaagttattctgcggtcgttaat ggcacagagtatgttgtcgctctcaacatgagcaagttgattccaggattgaatcctttt actatatattctgttcgcctgaaggcctgtaccgctaaaggctgcggactcggggaaaga gagcatgcaagaactggcgaggctcctcccatcggacagggggcacctaccctggtagca cgagaatggaatgttgtacaagtctcttggtcgcggccttcctttccaaatggaatcgtc gtccaatatgtagtttaccgtaagacaggtaacagtgccccgcttccagtttgtttcacg ctccagcggtcatgtctgaatagtggtttgttaggttacacggattattcctatagaata agagttgtaaacagcgcaggctttgaagaaggcccttggaccgacgtgcgcactcctcag gggcctcctcaaggcatacgaccaccttctcttacagtactcaactccactgcagtgtat ctttcatggactgtaccctctcagcccaacggtatagtcacacactatgaagtgcgctat cacaaaggactacaaactcccgacaacagtaacgtcacagtagcagctcggttgcctagc aacgtactgaacgccacggtgagcgggctagacccttatacggactatcagttcctgatc gctgccatcaacagccggcgtgagggggtgagcgcctgggcgacagcaaaaaccaaacaa gcaccaccagcagaccttcctctccttcgtgctgacaagacgaaagatggaaagagcatg cgcatgttgtgggatgagcccgggtctcctaacggggtcattactcactacaaactgtac aaagacagtgtcttgatttatcgcggcagcatccgagaatacacggtctcaagacttgtt ccttacactgcgtacgagtttcagctagaggcctgtaatgttgcagggtgcacgcggggt cccacgcaaatcattttctccgcagaggtggacccacaaggcctgtcccgacctacaaca gggtttatcaatgccacagctgtggagctgaactggagatcgccagcaattccaaacgga atcatcatccgttatgagatttacatgacggtcacgccgcttcagaagcgacgaaggcgc gctgtaacacctccctccggtcaactggtgtattccaccaatgatacaaacaagacagat ttcaagcacacagagacgggattgaagccttacacaaagtacgggtttagtgtacgcgcg gtcaacggtggaggttttacggaaagcgacccactgatcgtaaccacatctcaagctgct ccttcgtccgtcgatgcaccactggtcttgttgatgaccgtgtattccttgaatgtgact tggaaaaaaccactagaacccaacggcgttgttcagttttattttgtgttcaggaacaat tctattaaatataaaggaaacgaactgagttttgtagatcaaggtctagagccatacacc gtatacagttacaccgtggaggtgtgtactagctgcaatgttgactgctgtacgcagagc tctccatcaagccgccgaacaactcaggctgcaccgtcgggtgtgtatcccccggcctta gaagcggaaagtgctttggctataaagatatcttgggtgacgcctgacaagcccaatgga atcattacccagtaccaagtgtatgaagttggtgacagttctccgatttataccggacag gacatgacgctcactgtaagcgggaaggcacctttctctaaatattccttttacattagt gcttgtacgagcgagggttgtacacagagtgcaccagctgaagtgcgcaccaaagaagct cctccgagagatctcctcgcccctgttgccacagtcggtggttcttcgtttgtgcgagta gaatggaatgcaccgctaaaaccatatggtgtaatactccactatctccttacacgtaat ggctcccaagtatacaacggtactgatctgaaatttaacgacctcactgtggccccacac accgtgtatatgtatgttgtgacggcagtgaattccgcgggccgcgtgtcaagtcctcct ggattcagcgctgctactaatcctggtgctccagacaatgtgagcatcccgacgttatat gttctcagtgcaacatccattaaagtcctgtggacagccccgggggttccaaacggtgtc atcttcaaatatgaagtattgtacaacttcatgggagcgcaaggcgttgcacaggtgaat gacgctggtattgccaaggagattaccctaaaagacctgttgccatatacgttgtatgaa gtcagaatccgcgcttgtacacttaaaggctgcagcataggagaggcgaactatgcccgt acatttgaggctccgccagagggtcagaatcccccagatttcccaacatctaatattggt gctaggagagtacttgtcacctggaatgagcctttaaaacccaacggatttatgctgtcg tacagactttacaggcgtggagtatcgttgtatggtaaccaggcgacagtgtatggtccg gcagagtctgtagtaaacgtaactaatggatctgctctagcttacagtgatacaaacgtg aagccgtacttcaagtataattaccgagttatctctgcaaacagcgctggtgaaacggtt agtcagtggtcgttggttcaaaccttgagtgcagcaccagagcagcttaaagcgcctcat gtgaacaagacttacccttacagtttggaagtgttcatcttcccacctggtgaacctaat ggagagataagaaattacatcctcgaagtttctggacgaaatgtatctcaagagctaacc actactcgtgaggtggcgggccttgagccatttacggactatgttctacgtgtgtacgtc tgcacggatggagggtgcgccgcgggacccactgcaacctggaagacctctgttggagtg ccgtcagagtttgccgccccacgcccgattgaaataaccaataacttcgtcacacttata tgggacgagccaggaaaacccaatggagtcatccaaagatatgaggttctgtttcatgaa acttgcgctgtcggttgtcctactgcaatgcccgagagtggactgaacacgagtttgtct cggcgttataccgttagaagcctgtcaccctatactatgtataacttcaggatacgagtt cacaactcacggcattcgagtttatcggatgaacaaagagtgcgaacactagctgcaggt ccacagacgacagaactgaggcctcgagtaaatgtgtccgggctccgagtggccgtggac tggagcgattgctttattttgaacggaccgctggactcctatgagctgttagaaaatgga ttgcttgtctatgaaggacagcaaaacaaaatggacttgggaaataggaataaaggagag tacacctacaaagtacatgccacaactttagtgcaaggaagcaaaatgactgtagaatca cctcccagtgttcctgttcaggtgcaatctgaagttattgcagcaacatcagcaccccgc actgcttcggatgagtggcaaaagagtgtttggtttattgctgtcatggcattggtcgcc atcattatcctgtttgcgttgatattctgttgtatgcggaaatccaccgggagtagaaca gtttttgtacggaacagggaacctttacctccacgcaccaaactgcgttccaggcctcca tccatgtccagtctttacacgtccagcgacagaaagagtggaagcatgactgagatgcat ttaatgaacccgtaccacagtagtaccacagctttgtttgacagcacagagaggctgaac aagactcccgaacaatttgacttttacaatggcagcatgcacaaagttcctccagatatg agtcaagactgggaccattatgtcaagagttatagcaacagggattctggactgtacgat gacgaaaaactggacttctcggacagtgaaccaagcacaccatatcaaagctttaagagg gagcagtactttacggatacacacttataa

DBGET integrated database retrieval system