KEGG   Pseudomonas danubii: PFZ56_01550
Entry
PFZ56_01550       CDS       T11866                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pdan  Pseudomonas danubii
Pathway
pdan03030  DNA replication
pdan03430  Mismatch repair
pdan03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PFZ56_01550
   03430 Mismatch repair
    PFZ56_01550
   03440 Homologous recombination
    PFZ56_01550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdan03032]
    PFZ56_01550
   03400 DNA repair and recombination proteins [BR:pdan03400]
    PFZ56_01550
Enzymes [BR:pdan01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PFZ56_01550
DNA replication proteins [BR:pdan03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PFZ56_01550
DNA repair and recombination proteins [BR:pdan03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PFZ56_01550
SSDB
Motif
Pfam: RNase_T Rv2179c-like DUF8678 RNase_H_2
Other DBs
NCBI-ProteinID: XHY65684
LinkDB
Position
complement(324341..324952)
AA seq 203 aa
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVPGFIEQLTGIS
NAMLRSAPPAEQVMNEVNEFVGTTPLLAHNAAFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTSFAGLPHTGQAHRAMADAEMAANLVAHLAGELRHKHGLRELSHD
FLCKLQKVPAAKIPEHLKRQRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgtattgccgtcatcgactttgaaaccaccgggatctccccgagcagcagttgc
cgggccacggaaatcgccgtggtgattcttgagcaggggcgcatcgtcgagcgttaccag
agcctgatgaatgccggcgtgcgggtgccgggttttatcgaacaactgaccggcatcagc
aacgccatgctgcgcagcgccccgccagcggagcaggtgatgaacgaggtcaacgagttt
gtcggcaccacgccgttgctggcccacaacgcggccttcgaccagaagttctgggatttc
gagctggggcggatcaagcgcacccgcttgcagaatttcgcctgttccctgctgctggcc
cggcgcctgatgccggcggcgccgaaccacaagctgggcaccctgacctcatttgccggc
ttgccccacaccggtcaggcgcaccgggccatggccgacgcggaaatggccgccaacctg
gtggcgcacctggccggcgagctacgccacaagcatggcttgcgtgaactgtcccacgac
ttcctctgcaagttgcagaaggtcccggctgccaagatccccgagcacctcaagcgccag
cgcggtttctga

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