Pseudomonas danubii: PFZ56_04765
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Entry
PFZ56_04765 CDS
T11866
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pdan Pseudomonas danubii
Pathway
pdan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PFZ56_04765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdan03400
]
PFZ56_04765
Enzymes [BR:
pdan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
PFZ56_04765
DNA repair and recombination proteins [BR:
pdan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PFZ56_04765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
XHY66298
LinkDB
All DBs
Position
1004097..1004876
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFARYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDGQQSPGFLAPERAWMDE
IIGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGSRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgtcaatggtattcaggctgcagtggagcgtggtttgctc
agttggctgcaggcacagaatgccgacgtcatctgcctgcaggacacccgcgcctctgcc
tttgaactggacgacccagccttccaactggatggctacttcctttatgcctgcgatgct
gaagtccctgcccaaggcggtgtggctttgtattcgcggttgcagccgaaggcggtcatc
agcggcctcggcttcgagacagccgatcgttacgggcgctacctgcaagccgatttcgac
aaggtcagcatcgcgaccttgctgcttccatcagggcagaacggcgatgaagacttgaac
cagaagttcaagttaatggatgacttcgcccgttatctggataagcagcggcgcaaacgt
cgcgagtacatttattgtggctcgctgtacgtggcgcaacagaagctggatatcaagaac
tggcgtgacggccagcaatctccgggcttcctggcacctgagcgcgcctggatggacgag
attataggcaacatgggctacgtcgacgccctgcgcgaagtcagtcgcgaaggcgaccag
tacagctggtggccggacaacgaacaggccgagatgctcaacctgggctcgcgcttcgac
tatcagttgctgactcccggcctgcgccgttttgtccgcagcgcacgcttgccgcgtcag
ccgcgtttttcgcagcatgcgccgctgatcgtggactatgactggacactgaccatctaa
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