Pseudomonas danubii: PFZ56_06580
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Entry
PFZ56_06580 CDS
T11866
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdan Pseudomonas danubii
Pathway
pdan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFZ56_06580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdan03021
]
PFZ56_06580
Transcription machinery [BR:
pdan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFZ56_06580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_31
HTH_23
PhyR_sigma-like
HTH_40
HTH_11
HTH_Tnp_4
Fe_dep_repress
HTH_SB
HTH_36
Motif
Other DBs
NCBI-ProteinID:
XHY66635
UniProt:
A0ACH3BIZ1
LinkDB
All DBs
Position
1412685..1413194
Genome browser
AA seq
169 aa
AA seq
DB search
MEATTDGNAQLHRLYRDHHGWLQSWLRKRLGDREHAADVAQDTFLRLLLSGRFPGHQESR
SYLAQIARNLVIDQWRRLRIERAYLESIAHLPEPQTPSLESRALILETLMQIDAMLDRMP
DKVRQAFVMSQFEGLGYAQIAERLEVSVSSVQKYMIRAIQACYQVLYEE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaccactgacggtaacgcccagctccatcgtctgtatcgagatcatcacggt
tggctgcagagctggttgcgcaagcgcctgggcgatcgcgagcatgcggcggacgtggcg
caggacactttcctgcgcctgttgctgtcggggcgctttcccgggcaccaggaaagccgc
agttacctggcgcagatcgcgcgcaatctggtgatcgaccagtggcgccggttgcgcatc
gagcgcgcctacctggaaagcatcgcccacctgccggaaccccagacgccttccctggaa
agccgcgcactgatcctcgaaaccctgatgcagatcgacgccatgctcgatcgcatgccg
gacaaggtgcgccaggcctttgtcatgtcgcagttcgaagggctgggttatgcccagatt
gccgagcgcctggaggtttctgtcagttcggtgcagaagtacatgatccgtgcgatccag
gcttgctatcaggtgctttacgaagaatga
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