KEGG   Pseudomonas danubii: PFZ56_07200
Entry
PFZ56_07200       CDS       T11866                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pdan  Pseudomonas danubii
Pathway
pdan00010  Glycolysis / Gluconeogenesis
pdan00020  Citrate cycle (TCA cycle)
pdan00260  Glycine, serine and threonine metabolism
pdan00280  Valine, leucine and isoleucine degradation
pdan00310  Lysine degradation
pdan00380  Tryptophan metabolism
pdan00620  Pyruvate metabolism
pdan00630  Glyoxylate and dicarboxylate metabolism
pdan00640  Propanoate metabolism
pdan00670  One carbon pool by folate
pdan00785  Lipoic acid metabolism
pdan01100  Metabolic pathways
pdan01110  Biosynthesis of secondary metabolites
pdan01120  Microbial metabolism in diverse environments
pdan01200  Carbon metabolism
pdan01210  2-Oxocarboxylic acid metabolism
pdan01240  Biosynthesis of cofactors
Module
pdan_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pdan_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdan_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pdan_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pdan_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pdan00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PFZ56_07200 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PFZ56_07200 (lpdA)
   00620 Pyruvate metabolism
    PFZ56_07200 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PFZ56_07200 (lpdA)
   00640 Propanoate metabolism
    PFZ56_07200 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PFZ56_07200 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PFZ56_07200 (lpdA)
   00310 Lysine degradation
    PFZ56_07200 (lpdA)
   00380 Tryptophan metabolism
    PFZ56_07200 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PFZ56_07200 (lpdA)
   00670 One carbon pool by folate
    PFZ56_07200 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdan04147]
    PFZ56_07200 (lpdA)
Enzymes [BR:pdan01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PFZ56_07200 (lpdA)
Exosome [BR:pdan04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PFZ56_07200 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_binding_2 FAD_binding_3 FAD_oxidored HI0933_like Thi4 AlaDh_PNT_C NAD_binding_8 DAO 3HCDH_N 2-Hacid_dh_C Amino_oxidase Lycopene_cycl
Other DBs
NCBI-ProteinID: XHY66753
LinkDB
Position
1537022..1538476
AA seq 484 aa
MSEQYDVIVIGAGPGGYVAAIRAAQLGLKTVCIERYKGKDGKTALGGTCLNVGCIPSKAL
LDSSHHYYEARNGFEVHGIGIRNPQMDVPAMLARKDNVVRNFNGGIASLFKANGVALLEG
HGKLLANKEVEVTAADGSTQRISAPSIILAPGSRPIDIAAAPLTDKVIVDSTGALEFTHV
PKRLGVIGAGVIGLELGSVWARLGAEVTVLEALDSFLPAVDVQIAKEAQKIFGKQGLDIR
LGARVTASEVQGDSVKVSLSEGGEDKQQTFDRLIVAVGRRPLTTDLLAADSGVQLDERGF
IHVDGQCLTSVPGVFAIGDVVRGPMLAHKASEEGVMVAESLAGHHHPLNYELIPSVIYTH
PEIAWVGQTEQALKAQGIELNIGTFPFSASSRAMAANDTAGLVKVIADASTDRVLGVHVI
GPGAAELVQEGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALSVNGQAIHIGNRKKKAP
SSVK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgagtgaacaatacgatgtgatcgtgatcggcgcgggtcctggtggctatgtcgcggcg
atccgggcggcgcagttgggactgaagacggtctgtatcgagcgctacaagggcaaggac
ggcaagaccgctctgggcggcacctgcctcaatgtgggctgcattccttccaaggcattg
ctggacagctctcatcactattacgaggcgcgcaacggttttgaagtgcacggcattggc
atccgcaatccgcagatggatgtgccggccatgctggcgcgcaaggacaacgtggtgcgc
aatttcaacggcggcatcgcctcgctgttcaaggccaatggcgtggccctgctggaaggt
cacggcaagttgctggccaacaaggaagtggaagtcaccgcggccgacggcagcacccag
cgcatcagtgcccccagcatcatcctcgcccccggctcccgccccatcgacatcgccgcc
gcaccgctgaccgacaaggtgatcgtcgactccaccggagccctggaattcacccacgtg
cccaagcgcctcggggtgatcggcgccggcgtcatcggcctggaactgggctcggtctgg
gcccgcctgggcgccgaagtgacggtgctcgaagccctcgacagcttcctgccggcagtg
gacgtgcagatcgccaaggaggcgcagaagatctttggcaagcaaggcctggatatccgc
ctgggggcccgggtgacggcgtccgaagtgcaaggcgacagcgtcaaggtcagcctcagc
gagggcggcgaggacaagcagcagaccttcgaccgcctgattgtcgccgtgggtcgtcgg
cccctgaccaccgatctgctggccgccgacagcggtgtgcagttggacgagcgcggcttt
attcatgtcgatggccagtgcctgaccagcgtgcctggggtgttcgccattggcgacgtg
gtgcgcggcccgatgctggcgcacaaggcgtcggaggagggggtgatggtggccgagagc
cttgccgggcatcaccatccgctcaattacgagctgatcccgtcagtgatctacacccac
ccggaaatcgcctgggttggccagaccgaacaggccctcaaggcccagggcatcgagctg
aacatcggcaccttcccgttctccgccagcagccgggccatggcggccaacgacaccgcc
gggttggtcaaggtcattgccgatgccagcaccgaccgggtacttggggtgcatgtgatc
ggcccgggcgctgcggaactggtccaggaaggcgcgatcggcatggagttcggcaccagc
gccgaagacctgggaatgatggtgttctcccacccgaccctgtccgaagccctgcatgaa
gccgccttgtcggtgaatggccaggcgattcatatcggcaatcgcaagaagaaagctccc
tccagcgtcaaatag

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