Pseudomonas danubii: PFZ56_11465
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Entry
PFZ56_11465 CDS
T11866
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pdan Pseudomonas danubii
Pathway
pdan00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pdan00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PFZ56_11465 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pdan01007
]
PFZ56_11465 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdan03016
]
PFZ56_11465 (lysS)
Enzymes [BR:
pdan01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PFZ56_11465 (lysS)
Amino acid related enzymes [BR:
pdan01007
]
Aminoacyl-tRNA synthetase
Class II (A)
PFZ56_11465 (lysS)
Transfer RNA biogenesis [BR:
pdan03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PFZ56_11465 (lysS)
Prokaryotic type
Other AARSs
PFZ56_11465 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
XHY67562
UniProt:
A0ACH3BLV8
LinkDB
All DBs
Position
2502680..2504182
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AA seq
500 aa
AA seq
DB search
MSDQQLDPQALQQEENSLIALRKEKLAAERAKGNAFPNDFRRENYCEDLQKKYADKTKEE
LAEAAIPVKVAGRIMLNRGSFMVIQDMTGRIQVYVNRKTLSEETLAAVKTWDMGDIIAAE
GTLARSGKGDLYVEMTHVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEDVRQTFR
VRSQVIAHIRSFLMKRDFLEVETPMLQTIPGGAAAKPFETHHNALDMEMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYEDNMDLTEELFRELAQLV
LGSTDVPYGDKVFHFGEPFARLSVFDSILKYNPELTADDLNDIDKARAIAKKAGAKVLGF
EGLGKLQVMIFEELVEHKLEQPHFITQYPFEVSPLARRNDENPNVTDRFELFIGGREIAN
AYSELNDAEDQAERFMAQVADKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaacaactcgacccgcaagccctgcaacaggaagaaaactccctgatcgcc
ctgcgcaaggaaaagcttgctgccgagcgcgccaagggcaatgccttcccgaacgacttc
cgccgcgaaaactactgcgaagatctgcagaaaaagtacgccgacaagaccaaggaagag
ctggcagaggcggcgatcccggtcaaggttgctggtcgcatcatgctcaaccgtggctcg
ttcatggtgatccaggacatgaccggtcgcatccaggtctacgtcaaccgcaagaccctg
tccgaagaaaccctggccgcggtgaaaacctgggacatgggcgacatcattgccgccgaa
ggcaccctggcccgttccggtaagggtgacctgtacgttgaaatgacccacgtgcgcctg
ctgaccaagtcgctgcgtccgctgccggacaagcaccacggcctgaccgacaccgagcag
cgctaccgccagcgctacgttgacctgatcgtcaacgaagacgtgcgtcagaccttccgc
gtgcgttcgcaagtcattgcccacatccgcagcttcctgatgaagcgtgacttcctcgaa
gtcgaaacgccgatgctgcagaccattcctggcggcgccgcggccaagccgttcgagact
caccacaacgccctggacatggaaatgttcctgcgtatcgcgcccgagctgtacctcaag
cggctggtggttggcgggtttgaaaaagtgttcgagatcaaccgcaacttccgtaacgaa
ggcgtttcgactcgtcacaaccctgaattcaccatgttggagttctaccaggcctacgcc
gactacgaagacaacatggacctgaccgaagaactgttccgtgaactggcgcagctggtg
ctgggcagcaccgacgtgccttacggcgacaaggtgttccacttcggcgagccgttcgcc
cgtctctcggtgttcgattcgatcctcaagtacaaccctgagctgacggccgatgacctg
aatgacatcgacaaggctcgcgccatcgccaagaaggccggcgccaaggtgctgggtttc
gaaggtctgggcaagctgcaggtgatgattttcgaagagctggtggagcacaagctggag
cagccgcacttcatcacccagtacccgttcgaggtgtcgccactggcccgtcgcaacgac
gagaaccccaacgtcaccgaccgtttcgagctgttcatcggcggccgcgagatcgccaac
gcctactccgagctcaatgacgcggaagatcaggccgagcgcttcatggcccaggtggcc
gacaaggacgccggtgacgacgaagccatgcactacgacgccgacttcgtccgtgccctg
gaatacggcatgccgcccaccgccggtgaaggtatcggtatcgaccgtctggtgatgctg
ctgaccaactcgccgtcgattcgcgacgtgatcctgttcccgcacatgcggccgcaagct
taa
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