Pseudomonas danubii: PFZ56_11560
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Entry
PFZ56_11560 CDS
T11866
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
pdan Pseudomonas danubii
Module
pdan_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pdan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdan02000
]
PFZ56_11560
01504 Antimicrobial resistance genes [BR:
pdan01504
]
PFZ56_11560
Transporters [BR:
pdan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
PFZ56_11560
Antimicrobial resistance genes [BR:
pdan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PFZ56_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-ProteinID:
XHY67579
LinkDB
All DBs
Position
2520762..2523818
Genome browser
AA seq
1018 aa
AA seq
DB search
MGFNLSAWALRNRQIVLFLMLLLAIVGALSYTKLGQSEDPPFTFKAMVIRTNWPGATAQE
VSRQVTERIEKKLMETGEYDRIVSFSRPGESQVTFIARDSMHSNEIPELWYQVRKKISDI
RQSLPPGIQGPFFNDEFGTTFGNIYALTGQGFDYAVLKDYADRIQIQLQRVKDVGKVDLL
GLQDEKIWIELSNVKLATLGLPLAAVQKALEEQNAVSTAGFFETPSERVQLRVSGNFQTV
EQIRNFPIRVADRTFRIGDVADVRRGFNDPPAPRMRFMGEDAIGLAVAMKDGGDILVLGK
ALEGEFSRLQKSLPAGMELRKVSDQPAAVKTGVGEFVRVLAEALIIVLLVSFFSLGVRTG
MVVALAIPLVLAITFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGFD
RIKAASFAWTSTAFPMLTGTLITAAGFLPIATAQSGTGEYTRSIFQVVTIALVASWIAAV
VFVPYLGEKLLPDLAKIHAAKHGAESNPHGTPFYQRVRRVVGWCVERRKTVIVLTILAFV
GSVMLFRFVPQQFFPASGRLELMVDLKLAEGASLSNTADEVKRLEAMLKDHPGIDNYVAY
VGTGSPRFYLPLDQQLPATSFAQFVVLAKTIEERESLRSWLIATLNEQFPALRSRVTRLE
NGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENPHVVNVHLDWEEPSKVVYLNIDQDR
ARALGVSTANLSKFLQSSLIGSTVSQYREDNELIEILLRGTQQERTELALLPSLAVPTDN
GQSVSLSQVATLEYGFEEGVIWHRNRLPNVTVRADIYGKEQPATLVQQILPTLEPIRAEL
PDGFLLEVGGTVEDSARGQNSVKAGVPLFIVVVLTLLMIQLRSFSRTAMVFLTAPLGLIG
VTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIKAGLRPWDAIIEATVRRF
RPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIIATVLTLLFLPALYAAWFRVRKD
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcaacctttctgcatgggcgttgcgcaatcgccagatcgtcctgttcctgatg
ctgttgctggccattgtcggtgcgctgtcctacaccaagctgggccagagcgaagacccg
cctttcaccttcaaggccatggtgatccgcaccaactggccgggggccacggcccaggaa
gtgtcgcgccaggtcaccgagcgcattgaaaagaaactcatggaaaccggcgagtacgat
cgcatcgtttccttctcccgccccggggaatcccaggtgaccttcattgcccgggattcg
atgcactccaacgagattcccgaactctggtatcaggttcgcaagaagatcagcgacatt
cgccagtccctgccgccgggcatccagggaccgttcttcaacgatgaattcggtacgacc
ttcggcaatatctatgcgctgacagggcagggcttcgactacgccgtgctcaaggactat
gccgaccgtatccagatccagctgcagcgggtcaaggacgtgggcaaggtcgatctgctg
ggcctgcaggacgaaaagatctggatcgagctatccaacgtcaagctggcaaccctgggc
ctgcccctggcagcggtgcaaaaggcgctggaggagcagaacgcggtgtctactgcgggg
ttcttcgagacccccagcgagcgggtgcaattgcgggtatccggcaacttccagacggtg
gagcagattcgcaatttcccgatccgggtcgccgatcgcaccttccgcattggtgatgtg
gcggatgtgcgtcgcggctttaatgatccaccggcaccgcgcatgcgtttcatgggggaa
gacgccattggcctggccgtggcgatgaaggacggcggcgacatcctggtgttgggcaag
gccctggaaggcgagttctcccgcctgcagaaaagcctgccggcggggatggagttgcgc
aaggtgtccgatcagccggcggcggtgaaaaccggggtcggcgagtttgtccgggtgctg
gccgaggccctgatcattgtcctgctggtgagcttcttctccctgggtgtgcgcaccggc
atggtggtagccctggcgattcccttggtgctggcgatcacgttcgccaccatgtactac
ctggggataggcctgcacaagatttccctgggcgccctggtgctggcgttggggctgttg
gtggatgacgcgatcattgcggtggagatgatggcgatcaagatggagcaggggttcgac
cggatcaaggccgccagctttgcctggaccagtaccgcctttcccatgctcaccggcacc
ctgattaccgcagcgggctttttgccgattgccacggcccagtccggcaccggcgagtac
acccgctcgatcttccaggtggtgaccatcgccctggtggcttcgtggattgccgccgtg
gtcttcgttccctacctgggggaaaagctcctgccggacctggccaagatccacgccgcc
aagcacggcgccgagtccaatccccacggcacgcctttctaccagcgcgtgcgccgggtg
gtgggctggtgcgtggagcggcgcaagaccgtgatcgtcctgaccatcctggcgttcgtc
ggttcggtgatgctgttccgttttgtcccgcagcagttcttcccggcctcgggccgcctg
gaattgatggtcgacctgaaactggcggaaggtgcttccctgagcaacaccgccgatgag
gtcaagcgcctggaggcgatgctcaaggaccacccaggcatcgacaactacgtggcttat
gtggggaccggttcaccgcgtttctacctgccgctggaccagcaactgccggccaccagc
tttgcccagttcgtggtgctggccaagaccatcgaggagcgggagagcctgcgcagttgg
ctgatcgcgaccctcaatgaacagttcccggccttgcgctctcgggtcacgcgcctggag
aacggtccgccagtgggttacccggtgcagttccgggtcacaggcgagcacatcgaggag
gttcgcgccctggcgcgcaaggtggcggccaaggtgcgggagaacccccatgtggtcaac
gttcacctggactgggaggagccgagcaaggtggtctacctgaatatcgatcaggaccgg
gcccgggcgctgggtgtcagcaccgccaacctgtcgaagttcctgcagagctcgctgatc
ggttccaccgtcagccagtaccgtgaggacaacgaactgatcgagattctcctgcgcgga
acccagcaggaacgcactgagctggccttgttgccaagcctggcagtgcccaccgacaac
ggccagagcgtgtcgctgtcccaggtcgcgaccctggagtacggcttcgaggaaggggtg
atctggcaccgtaaccgcttgcccaacgtcaccgtgcgtgccgatatctacggcaaggaa
caaccggcgacgttggtgcagcagattctgccgaccctggagccgattcgcgccgaactg
ccggacggcttcttgctggaggtgggcggcactgtcgaggattcggcccgtggccagaac
tcggtgaaggccggcgtgccgctgttcatcgtggtagtgctgaccttgctgatgattcag
ctgcgcagtttttcgcgcaccgccatggtgttcctcactgcgcccctggggctgatcggg
gtcaccctgttcctcctggtgttccgccagcccttcggctttgtggccatgctcggcacc
attgccctgtccgggatgatcatgcgcaactcggtgatcctggtggaccagatcgaacag
gacatcaaggctggcctgcgtccctgggatgcgatcatcgaagccactgtgcggcgtttc
cgtcccatcgtgctgactgccctggcggcagtactggcgatgattccgttgtcgcgcagt
gtgttcttcgggccgatggcggtggccatcatgggcggcctgattatcgccacggtcttg
accctgctgtttctgccagcgctgtatgcggcctggttccgggtcaggaaggactga
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