KEGG   Pseudomonas danubii: PFZ56_14385
Entry
PFZ56_14385       CDS       T11866                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pdan  Pseudomonas danubii
Pathway
pdan00010  Glycolysis / Gluconeogenesis
pdan00020  Citrate cycle (TCA cycle)
pdan00260  Glycine, serine and threonine metabolism
pdan00280  Valine, leucine and isoleucine degradation
pdan00310  Lysine degradation
pdan00380  Tryptophan metabolism
pdan00620  Pyruvate metabolism
pdan00630  Glyoxylate and dicarboxylate metabolism
pdan00640  Propanoate metabolism
pdan00670  One carbon pool by folate
pdan00785  Lipoic acid metabolism
pdan01100  Metabolic pathways
pdan01110  Biosynthesis of secondary metabolites
pdan01120  Microbial metabolism in diverse environments
pdan01200  Carbon metabolism
pdan01210  2-Oxocarboxylic acid metabolism
pdan01240  Biosynthesis of cofactors
Module
pdan_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pdan_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pdan_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pdan_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pdan_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pdan00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PFZ56_14385 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PFZ56_14385 (lpdA)
   00620 Pyruvate metabolism
    PFZ56_14385 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PFZ56_14385 (lpdA)
   00640 Propanoate metabolism
    PFZ56_14385 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PFZ56_14385 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PFZ56_14385 (lpdA)
   00310 Lysine degradation
    PFZ56_14385 (lpdA)
   00380 Tryptophan metabolism
    PFZ56_14385 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PFZ56_14385 (lpdA)
   00670 One carbon pool by folate
    PFZ56_14385 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pdan04147]
    PFZ56_14385 (lpdA)
Enzymes [BR:pdan01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PFZ56_14385 (lpdA)
Exosome [BR:pdan04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PFZ56_14385 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_oxidored HI0933_like NAD_binding_8 FAD_binding_3 AlaDh_PNT_C DAO 3HCDH_N Thi4 2-Hacid_dh_C Amino_oxidase ARMC6_N
Other DBs
NCBI-ProteinID: XHY68115
LinkDB
Position
3113747..3115183
AA seq 478 aa
MTQKFDVVVIGAGPGGYVAAIKAAQLGFTTACIEKYTDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFHEAQDGFAIHGISHAGVTMDVPAMVGRKASIVKGLTSGVATLFKANGVTSIQG
HGKLLAGKKVEVTKPDGSVEVIEAENVILAPGSRPIDIPPAPVDQNVIVDSTGALEFQAV
PKRLGVIGAGVIGLELGSVWSRLGAQVTVLEALDTFLMAADTAVSKEALKTLTKQGLDIK
LGARVTGSKVNGEEVVVTYTDANGEQTITFDKLIVAVGRRPVTTDLLAADCGVTLDERGF
VHVDDHCATTVPGVYAIGDVVRGMMLAHKASEEGIMVAERIKGHKAQMNYDLIPSVIYTH
PEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGTAIHIANRKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgactcagaaattcgacgtggtagtgattggcgcgggcccaggcggttatgtcgccgca
atcaaggccgcacaactcggtttcaccaccgcttgcatcgagaagtacaccgataaagag
ggcaagctggccctcggcggtacttgcctgaacgtcggttgcattccttccaaggcgctg
ctggacagctcctggaaattccatgaggcccaggacggtttcgccatccacggtatcagc
cacgctggcgtgaccatggacgtaccggccatggtcggtcgcaaggccagcatcgtcaaa
ggcctgaccagcggtgttgccaccctgttcaaagccaacggcgtcacttcgatccaaggc
cacggcaaactgctggcaggcaagaaagtcgaagtcaccaagccggacggttcggttgaa
gtcatcgaagctgaaaacgtgatcctggctccgggttcgcgtccaatcgacattccaccg
gccccggtcgatcagaatgtcatcgtcgactccaccggcgcgctggaattccaggccgta
ccaaaacgtctgggcgtgatcggcgctggcgttattggtctggaactgggctcggtctgg
tcgcgtctgggcgcgcaagtgactgtcctggaagccctggacaccttcctgatggcagct
gacaccgctgtttccaaggaagcgctgaaaaccctgaccaagcagggtctggacatcaag
ctgggcgctcgcgtgaccggctccaaggtcaacggcgaagaagtcgtggtgacctacacc
gacgccaacggcgaacagaccatcactttcgacaagctgattgtcgccgttggtcgccgt
ccggtgaccaccgatctgctggctgccgactgcggcgtgaccctcgacgagcgcggtttc
gtgcacgttgacgatcactgcgctactaccgtaccgggcgtctacgccattggtgacgtg
gtgcgcggcatgatgctggctcacaaggcctcggaagagggcatcatggttgccgagcgc
atcaagggccacaaggcccagatgaactatgacctgatcccttcggttatctatactcac
ccggaaattgcatgggtcggtaaaaccgagcaggccttgaaagctgaaggcgttgaagtt
aacgtcggcacctttccgtttgccgccagcggccgtgccatggcagccaacgacaccggt
ggtttcgtcaaagtcatcgccgatgccaagactgaccgcgtattgggcgtccacgtgatt
ggcccaagcgctgcggaactggttcagcaaggtgcaatcggcatggaattcggcaccagc
gccgaagacctgggcatgatggttttctctcatccgaccctgtccgaagccctgcacgaa
gcagctctggctgtgaatggcaccgccatccacattgccaaccgcaagaaacgctaa

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