Pseudomonas danubii: PFZ56_17090
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Entry
PFZ56_17090 CDS
T11866
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdan Pseudomonas danubii
Pathway
pdan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PFZ56_17090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdan03021
]
PFZ56_17090
Transcription machinery [BR:
pdan03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PFZ56_17090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
GerE
HTH_24
HTH_3
HTH_11
Sigma70_ECF
HTH_Tnp_4
HTH_31
PhyR_sigma-like
HTH_29
HTH_40
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
XHY62939
UniProt:
A0ACH3BA68
LinkDB
All DBs
Position
3707032..3707553
Genome browser
AA seq
173 aa
AA seq
DB search
MPADDLSLRSAVTDLYTHHHGWLQGWLRQRLGNTFDAADLAQDTFVRVLKARNALEIREP
RPYLSRIANGLLIDLFRRRSLEQAYLEALALVPEGEQPSPEEQNLMLQALLEVDRLLDGL
GARVKQAFLLSQCDGLTYEQIAERLQISVRSVNNYMAKAMEHCCLMQMRMQLS
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgacttatccctgcgcagtgccgtcaccgatctgtacacccatcaccac
ggctggctgcagggctggttgcgccagcgcctgggcaacaccttcgatgccgccgatctg
gcccaggacaccttcgtacgggtgctcaaggcgcgcaatgccctggagatccgcgagccg
cggccctacctgtcgcgcatcgccaatggcttgctgatcgatctgtttcgccgccgctcc
ctggagcaggcgtacctggaggccctggcgctggtgcccgagggcgagcagccgtcgccg
gaggagcagaacctgatgctccaggcactgttggaagtcgaccggctgctggacggcctg
ggggccagggtcaagcaagctttcctgctgtcccagtgcgatggcctgacctacgagcag
atcgccgaacgcctgcagatctcggtgcgcagcgtcaacaactacatggccaaggccatg
gagcattgctgcctgatgcagatgcggatgcagctgtcatga
DBGET
integrated database retrieval system
