Pseudomonas danubii: PFZ56_23390
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Entry
PFZ56_23390 CDS
T11866
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
pdan Pseudomonas danubii
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
AAA_2
GAF
HTH_50
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
XHY64132
LinkDB
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Position
complement(5209443..5210960)
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AA seq
505 aa
AA seq
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MFTRVPQPLAYAEALLAQFSALSRAAQGAVLLEDFVRGAAQLSGCELSQLYLLDATHSCL
QLRAECLGGLLQPREVINLPSDYSGEQLLQFALCQNRVVSLVGLNHSLHDTSFLPVHSAA
WQSLLCVPLVNARKAVEGLLLCASPQQQDLQAFAQSLGQLGAFVLGQWALLQRLRLPAGE
PAPLLPPEVITSGYGLIGTSPAMRQAYQLISKVLHSPYTVLLRGETGTGKEVVARAIHDY
GPRRSQAFVVQNCAAFPENLLESELFGYRKGAFTGADRDRPGLFDAANGGTLLLDEIGDM
PLSLQAKLLRVLQDGEIRPLGSNDTHTIDVRIIAATHRDLAALVGEGKFREDLYYRLAQF
PIELPALRQREGDILDLARHFADKACAFLQKDPVSWSPTALNHLSGYAFPGNVRELKGLV
ERAVLLCEDGELMAEHFSLNVEVMPEEPGLNLREQLEKVERHLLLDCLRKNDGNQTLAAR
ELGLPRRTLLYRLGRLNINLDDFVV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttcactcgggtgccgcagccgctggcctatgcagaggcactgctggcgcaattttcc
gctttgtcccgggcggcgcaaggcgctgtgctgcttgaagactttgtgcgaggcgcagca
cagctcagtggctgtgaactgagtcagctgtatctgctcgatgccacccatagctgcctg
caactgcgcgccgaatgcctcggcggccttttacaaccgcgggaagtgatcaacctgccg
agcgattacagcggtgagcaactgctgcagtttgccctgtgccagaaccgggtggtgagc
ctggtgggtctgaaccacagcctccacgacaccagcttcctgcccgtgcacagcgctgcg
tggcagtcactgttatgcgtaccgctggtcaacgcgcgcaaggctgtcgaaggcttgctg
ttgtgtgccagcccgcaacagcaagacctgcaagcctttgcccagtcgttgggccaactg
ggggcgtttgtccttggacaatgggcgttgctccagcgtttgcgtctgcccgcgggcgag
cctgcgccgcttctgccccccgaggtcatcaccagtggttatggcctgatcggcaccagt
ccggcgatgcgccaggcctatcagttgatcagcaaggtcctgcacagcccttacaccgtg
ttgctgcgtggcgaaaccggtaccggcaaggaagtggtggcgcgtgccattcatgattac
ggcccgcgtcgttcccaggcatttgtggtgcagaactgcgcggcgtttccggaaaacctg
ctggaaagcgagttgttcggttatcgcaagggggcgttcacgggcgctgaccgcgatcgc
cctggactgtttgatgcagccaatggcggcactttgttgctggacgaaatcggcgacatg
ccgctgtccctgcaagccaaattgcttcgggtcctgcaggacggcgagatccgcccgttg
ggctccaacgacacgcacaccatcgacgtgcggatcatcgccgccacccaccgcgatctg
gcggcgctggtgggcgaaggcaagttccgtgaggacctgtattaccgcctggctcagttc
ccgatcgagttgccggctttgcgacagcgtgaaggcgacattctcgacctggcccggcat
ttcgccgacaaggcctgtgccttcctgcaaaaggacccggtgagctggtcgccgacggcc
ctcaatcatctgtccggttacgcctttccaggcaacgtgcgcgagctcaaggggctggtg
gagcgtgcagtgctgctctgtgaagacggtgaactgatggccgagcatttctccctgaac
gttgaagtcatgcccgaagagccgggtctgaacctgcgcgagcagttggaaaaagtcgaa
cgccacctgttgctcgattgcctgcgcaagaacgacggcaatcagaccctggcggcccgg
gagctgggattgccccgtcgcacgctgctgtaccgcctggggcgcctgaacatcaatctt
gacgactttgtggtctag
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