Clostridioides difficile 630: CDIF630_00030
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Entry
CDIF630_00030 CDS
T03885
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma / tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03030
DNA replication
pdc03430
Mismatch repair
pdc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CDIF630_00030 (dnaX)
03430 Mismatch repair
CDIF630_00030 (dnaX)
03440 Homologous recombination
CDIF630_00030 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdc03032
]
CDIF630_00030 (dnaX)
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_00030 (dnaX)
Enzymes [BR:
pdc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CDIF630_00030 (dnaX)
DNA replication proteins [BR:
pdc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CDIF630_00030 (dnaX)
DNA repair and recombination proteins [BR:
pdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CDIF630_00030 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DNA_pol3_delta_C
RCF1-5-like_lid
AAA_22
DnaX_C
RuvB_N
AAA_24
AAA_assoc_2
AAA_5
Gp44_lid
AAA_30
AAA_18
AAA_7
PIF1
AAA_19
Mg_chelatase
TIP49_C
AAA_16
ResIII
Barwin
Motif
Other DBs
NCBI-ProteinID:
AJP09703
UniProt:
Q18C99
LinkDB
All DBs
Position
25765..27402
Genome browser
AA seq
545 aa
AA seq
DB search
MHKALYRAYRPQKFEDVIGQDHIIKTLKNQIYSDNIGHAYLFCGTRGTGKTSTAKIFSRA
VNCLNKINEEPCNECEICESVLKDNTMDVVEIDAASNNSVDDIRELRESVKYSPANAKYK
VYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRYDFKRVTVK
DMTLRMKKICEDEGIDIDDKALNLIARNSQGALRDALSILDQCMSFGESKIDYKDVVELM
GSVNIEQLFELSQCIVEQDTKKSLEILNEFVLWGKDIRNLINDLIDHFRNLMVCKVSSEL
DEIISLPEETIEQLKIQSKNIDINDLIRILNILSITQDDIKSSSNPRVLVEITIMKIAQP
MFDESKEALIKRVENLEKMIELGNFKSEKIGNNKEKEYEVDREIDVKQENVVYEDVKNED
VILIESSWKNILKQIKKDKKMPIYALLSEVKSFNVYSNMLYVIFDDKFDFAKTRLSSQDT
INYLEKTIRDVLNRSFNVKIVLTSEVKDINLEVKEKKDIGEEILKNIVSEEILEIKDSID
ENESK
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagcattatatagagcatatagaccacaaaaatttgaagatgttattggtcaa
gatcatattattaagactttaaagaatcaaatatatagtgataatataggacatgcttat
ttgttttgtggaacaagaggtactggtaaaacatctactgcaaagattttttcaagagca
gtaaactgtttgaataaaataaatgaagaaccgtgtaatgagtgtgagatatgcgaatct
gtattaaaagataatacaatggatgttgtagaaatagatgcagcttcaaataatagtgta
gatgatataagagagcttagagaaagtgtgaaatattctccagccaatgctaaatataaa
gtatatataatagatgaagttcatatgttgtctcaaggagcttttaatgcattattaaag
accttagaggaacctccatcatatgtaatttttatattagcaactacagagcctcacaaa
atacctgcaaccattttatcaagatgccaaagatacgattttaaaagagttacagttaaa
gatatgacccttagaatgaaaaagatttgtgaagatgaaggaattgatatagatgataaa
gctcttaatttaatagctagaaattctcaaggagctcttagagatgcacttagtatatta
gaccaatgtatgtcttttggagaaagtaagatagattataaagatgttgttgaattaatg
ggaagcgtaaatatagaacaattatttgaattgtctcaatgtattgtagagcaggacact
aaaaagtctcttgagatattaaatgaatttgtcttatggggcaaagatataagaaatctt
ataaatgacttaattgatcattttagaaatttaatggtatgtaaggtttcatcagaattg
gatgaaataatttcattaccagaagaaactatagaacaacttaaaattcagtctaaaaat
atagatataaatgatttaataaggattttaaatatattatcaataactcaggatgatata
aagtcatcttcaaatccaagggttttagtggaaataaccataatgaaaattgctcaacca
atgtttgatgaaagtaaagaagctcttataaaaagagttgagaacttagaaaaaatgatt
gaactggggaactttaagtctgaaaaaattgggaataataaagaaaaagagtatgaggtc
gatagagaaatagatgtaaaacaagaaaatgtagtttatgaagatgtaaaaaatgaggat
gttatacttatagagtcatcttggaagaatatacttaaacaaattaaaaaagataaaaaa
atgccaatatacgcactcttaagtgaagtaaaaagttttaatgtatattctaatatgttg
tatgttatatttgatgataaatttgattttgcaaaaactagactgagctctcaagataca
ataaattatttagaaaaaacaataagagatgttttaaatagaagttttaatgtaaaaata
gtactgacatcagaagttaaagatataaatcttgaagttaaagagaaaaaggacattggt
gaggaaatattaaagaacatagtgagtgaagagatattagaaataaaagatagtattgat
gaaaatgagagtaaataa
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