Clostridioides difficile 630: CDIF630_00312
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Entry
CDIF630_00312 CDS
T03885
Name
(GenBank) putative 8-oxoguanine-DNA-glycosylase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
pdc
Clostridioides difficile 630
Pathway
pdc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CDIF630_00312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdc03400
]
CDIF630_00312
Enzymes [BR:
pdc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CDIF630_00312
DNA repair and recombination proteins [BR:
pdc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CDIF630_00312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AJP09887
UniProt:
Q18CT2
LinkDB
All DBs
Position
254662..255537
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AA seq
291 aa
AA seq
DB search
MNVYEKGNGVILEGVTDFDPVHIFECGQCFRWHKQEDGSYTGVAKGRILNVKKENDKIYL
NNTNLKEFNSIWYNYFDLGTDYTEIKNKLKNMDEYLNKATEFGWGIRILRQDGWEMLISF
IISSNNRIPMIQRAIENLSRKFGKYIGEYEGNEYYAFPTPEELNKASQEEIRACQTGFRD
KYIKSTTQAVIENNDEVSEYTNLSTEDCRKELLKFNGVGPKVCDCIALFGMQKYDSFPVD
VWVKRVMQEFYIDEDMSLPKMRTYGIDKFKEMSGFAQQYLFYYARELGIGK
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtttatgaaaaaggtaatggagttatactagaaggagtaacagattttgaccca
gtacatatatttgagtgtggtcaatgttttagatggcacaaacaagaagatggctcatac
actggagttgcaaaggggagaatattaaatgtcaaaaaagagaatgataaaatatattta
aataatactaatttaaaggagtttaacagcatttggtataattactttgatttaggaact
gattatacagaaataaagaataagctaaaaaatatggatgaatatttaaataaggctact
gaatttggatggggaataagaatattaagacaagatggatgggaaatgcttatatcattt
ataatttcctctaataataggattcctatgatacaaagagcgatagaaaatttatcaaga
aaatttggtaagtatataggtgaatatgaaggtaatgaatactatgcattcccaacacca
gaagaactaaataaggcctcacaagaggaaataagagcatgtcaaacaggttttagagat
aagtacataaaaagtactacacaggcagttatagagaataatgatgaggtatctgaatat
acaaatttaagtacagaggattgtagaaaagagcttttaaaatttaatggagtaggacca
aaagtatgtgattgtattgcattatttggtatgcaaaaatatgattcttttccagttgat
gtttgggttaagagagttatgcaagaattttatatagatgaagacatgagtttacctaaa
atgagaacttatggaatcgataaatttaaagaaatgtctggatttgctcaacagtactta
ttttactatgcaagagaactcggtataggaaaataa
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