Clostridioides difficile 630: CDIF630_00338
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Entry
CDIF630_00338 CDS
T03885
Name
(GenBank) transposase IS200 / IS605-like OrfB
KO
K07496
putative transposase
Organism
pdc
Clostridioides difficile 630
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
CDIF630_00338
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
Glyco_hydro_97
BST2
C1_2
DUF1699
Motif
Other DBs
NCBI-ProteinID:
AJP09912
UniProt:
Q18CV8
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Position
284638..285801
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AA seq
387 aa
AA seq
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MIKTHRVKLNLTRTQFELVREKQMESANCWNYIVNLSKEYYFEHKQWIKKNDIQKLIKGK
YNLHSQTIQAISDKFDANRKTISELRKKGNTKAKYPYKTKKFYIIPFKASAINRNAKGNL
KLSMSKGRYLELDFNVENIKTAEIVWRNGYYLYYTFDNELNGVVAKGTNTVGVDLGEIHS
IASVTNEGVGLILSNREGRSIKQFRNKMYAYISKRLSKCKKGSRQSKKLWRLKNKIRSKT
DNQLMNLYHQTTRKFIDFCVEQKVCEIVLGDIKGVEKDTKKKKRLNRVNRQKISQMEYGR
IKDYIKYKAKEQGIEVKLVKENYTSQTCPKCSKKHKPTGRTYSCTCGYETHRDIVGAWNI
LNKKHKYGLVDFRINHKQPINLKVSTV
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaactcatagagtgaaattaaacctaactagaacacaatttgaattagtaagg
gaaaagcaaatggaaagtgctaactgttggaactacatagttaacttatctaaagaatac
tattttgaacataaacaatggattaaaaagaatgatatacaaaagttaatcaaaggtaag
tacaatcttcatagtcaaactattcaagctatatcagataaatttgatgcaaatagaaag
actatatcagaattaagaaaaaaaggtaatactaaagcaaaatatccatacaagactaag
aaattttatataataccttttaaagctagtgctattaatagaaatgctaaaggcaactta
aaattatcaatgtcaaaaggcaggtatttagaattagattttaatgttgagaatataaaa
actgctgaaatagtatggcgaaatggatattatttatactacacttttgacaatgaatta
aatggagttgtagccaaaggcactaataccgtaggtgtagacttaggggaaatacattcg
atagctagtgtaacaaatgaaggtgtagggcttattctatctaatagagaaggcagaagt
attaaacaatttagaaataagatgtatgcttatatatctaaaagattaagtaaatgtaaa
aaaggtagtagacaatcaaagaagttatggagattaaaaaataagataagaagtaaaaca
gataatcagttaatgaatttatatcatcaaacaactagaaagtttatagacttttgtgta
gagcagaaggtatgtgaaatagttcttggggatataaaaggggttgaaaaagatactaag
aaaaagaaaagattaaacagagttaatagacagaaaatatctcaaatggagtatggtcga
ataaaggactatataaaatataaagcaaaagagcaaggtattgaagttaagttagttaaa
gaaaactacacttctcaaacttgcccaaagtgttctaaaaaacacaaaccaactggtaga
acttatagttgtacttgtggttatgaaactcatagagatatagttggtgcttggaatatt
ttaaataaaaagcataaatatggtttagtagattttagaataaatcataagcaaccaata
aatttaaaagtatctaccgtttga
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