Clostridioides difficile 630: CDIF630_00425
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Entry
CDIF630_00425 CDS
T03885
Symbol
rbsB1
Name
(GenBank) ABC-type transport system, ribose-specific extracellular solute-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pdc
Clostridioides difficile 630
Pathway
pdc02010
ABC transporters
pdc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDIF630_00425 (rbsB1)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CDIF630_00425 (rbsB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdc02000
]
CDIF630_00425 (rbsB1)
Transporters [BR:
pdc02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
CDIF630_00425 (rbsB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
AJP09998
UniProt:
Q18D38
LinkDB
All DBs
Position
366379..367341
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AA seq
320 aa
AA seq
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MRVRKILSLGIAGILAIGMLTGCSMEGPSKSDNKGGSDKKDLTIGVSTITLQHQFFIDID
EGIKEKAKELGVKVIVNDPDQDVAKQTSAIEDFIQQNVDGMIVLGTDNSAIVPAVEGAFE
KMPVVTVDAVLNTENITSYVGTVSYDAGKKLGEYTKKYIDEKLGGKSEIAIVTDLKSQIQ
MQRIDGFKDALKGSANVKILNSQPGYDREESLNTVENLIQSNPDVDIIYATAENSVLGAK
AALESAKNKDVKIVGFDLTEEASSGITDGTILAMIQQQPKEMGRLAVEAVVKAIKGEKVE
KNIPVPALLYDKENIKDFKN
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgagaaaaattttatctttaggaattgctggaatactagcaataggaatgtta
acagggtgttcaatggaaggaccaagtaaatcagataataaaggtggttcagacaagaaa
gatttaactattggagtatctacaataactcttcaacatcaattttttatagatattgat
gagggaataaaagaaaaagctaaagaattaggtgtgaaagttatagtaaatgacccagac
caagatgtagctaagcaaacatcagcaatagaagattttatacaacaaaatgtagatgga
atgatagtacttggaactgataattcggctatagtaccagcagtagaaggagcatttgaa
aaaatgccagtagttacagtagatgctgtattaaatactgaaaatattacaagttatgta
ggaacagttagttatgatgctggtaaaaaattaggggaatacactaaaaaatacatagat
gaaaagttaggtggaaagtcagaaatagcaatagtgacagatttaaaatctcaaatacaa
atgcagagaatagatggatttaaagatgcattaaaaggttcagcaaatgttaagatatta
aattcacaaccaggatatgacagagaagaatctcttaatacagtagaaaacttaattcaa
tctaatccagatgtagatataatatatgcaacagctgaaaatagtgtactaggagctaaa
gctgcacttgaatctgcaaaaaataaggatgttaagattgtaggatttgacttaactgaa
gaagcatcaagtggaataacagatggaactattcttgctatgattcaacaacaacctaaa
gagatgggacgtttagctgtagaagcagtagtaaaagctataaaaggggaaaaggtagaa
aagaatataccagtaccagctttactttatgataaggaaaatataaaagactttaagaat
tag
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